Gene Information

Name : PADK2_27835 (PADK2_27835)
Accession : YP_006485530.1
Strain : Pseudomonas aeruginosa DK2
Genome accession: NC_018080
Putative virulence/resistance : Virulence
Product : alginate biosynthesis regulatory protein AlgR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6022364 - 6023110 bp
Length : 747 bp
Strand : -
Note : COG3279 Response regulator of the LytR/AlgR family

DNA sequence :
ATGAATGTCCTGATTGTCGATGACGAACCTCTGGCGCGAGAGCGCCTGGCCCGATTGGTAGGGCAACTGGACGGCTATCG
CGTCCTCGAGCCCTCGGCCAGCAATGGCGAAGAAGCGCTGACGCTGATCGACAGCCTCAAGCCCGATATCGTCCTGCTGG
ATATCCGCATGCCCGGTCTGGACGGCCTCCAGGTCGCGGCCAGACTCTGCGAGCGGGAAGCGCCGCCGGCTGTGATCTTC
TGCACGGCCCATGACGAATTCGCCCTGGAAGCCTTCCAGGTCAGCGCCGTGGGCTACCTGGTCAAGCCGGTGCGCAGCGA
AGACCTGGCCGAGGCGTTGAAGAAAGCCTCGCGACCGAACCGCGTGCAACTGGCCGCGCTGACCAAGCCCCCGGCCTCCG
GCGGCAGCGGTCCGCGCAGCCACATCAGTGCACGGACCCGCAAGGGGATCGAGCTGATCCCGCTGGAAGAGGTGATCTTC
TTCATTGCCGACCACAAGTACGTGACCTTGCGCCATGCGCAGGGCGAGGTGCTGCTGGACGAGCCGTTGAAGGCGCTGGA
AGACGAGTTCGGCGAGCGCTTCGTGCGCATCCACCGCAACGCGCTGGTCGCCCGCGAACGGATCGAACGCCTGCAGCGTA
CGCCGCTGGGGCATTTCCAGCTCTACCTGAAAGGCCTCGACGGCGATGCACTGACCGTCAGCCGGCGGCACGTGGCCGGG
GTCAGGCGTCTGATGCATCAGCTCTGA

Protein sequence :
MNVLIVDDEPLARERLARLVGQLDGYRVLEPSASNGEEALTLIDSLKPDIVLLDIRMPGLDGLQVAARLCEREAPPAVIF
CTAHDEFALEAFQVSAVGYLVKPVRSEDLAEALKKASRPNRVQLAALTKPPASGGSGPRSHISARTRKGIELIPLEEVIF
FIADHKYVTLRHAQGEVLLDEPLKALEDEFGERFVRIHRNALVARERIERLQRTPLGHFQLYLKGLDGDALTVSRRHVAG
VRRLMHQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00326 YP_008207791.1 Response regulator of the LytR/AlgR family Not tested AbaR25 Protein 2e-52 46
BJAB0868_00330 YP_008211656.1 Response regulator of the LytR/AlgR family Not tested AbaR26 Protein 2e-52 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PADK2_27835 YP_006485530.1 alginate biosynthesis regulatory protein AlgR VFG0119 Protein 1e-114 100