Gene Information

Name : PADK2_24130 (PADK2_24130)
Accession : YP_006484791.1
Strain : Pseudomonas aeruginosa DK2
Genome accession: NC_018080
Putative virulence/resistance : Unknown
Product : integrase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5186691 - 5187971 bp
Length : 1281 bp
Strand : +
Note : COG0582 Integrase

DNA sequence :
ATGACGCCGCAGCAGCTCACCGAGGAGTACATCTTCGCGCACGATCTCCGGGAAGCCAGCGCGAAGATCTACCGCGCCGC
GACCAAGGCGCTGCTCAAGCACTTCGGTCCTACGGCAACCGTACATGACGTGGACCACCGGGCTGTCCTGGGTTGGCGGC
GCAAGGTACTGGAACAAGGCCTATCGAAGCGGAGCTGGAACACGTACTCGAATCATCTGCGAACGATCTGGGGCTATGCC
ATCGAGCACGAGCTGGTGACGCACTCCCAAGTCAACCCGTTCAGAAAGACCACCGTCATCCCCCCCAGGCGAGCAAGCAA
AACCGTCGCAGCCGAAGCCATCCTGCGCGCCCGCAGTTGGCTCAACATGCAGGTCGGCGCCGAGCGCTGCACCGGCGATC
GCGCACGCATCACTCCCGCCTGGTTCTGGCTTTGCACGTTTGAGGTCTTCTACTACACCGGCATCCGGTTGAACGCGCTG
CTGTGCATCCGCAAGCGCGACATCGACTGGGATAATCAACTGATCCTCATCCGCGGCGAGACAGAGAAAACTCATAAAGA
GTTCGTAGTGCCAATAACGGAGGGGCTTGTGCCTCACCTATCGCGGCTCCTGCAGGAGGCCGATAGAGCCGGATTCGCCG
ATGACGACCAGTTGTTCAACGTCAACCGGTTCTCACCGCACTACAAGAGCAAGGTGATGAACTCCGACCAGGTCGAAGCC
ATGTACCGGAAGTTGACCGAGAAGGTTGCGGTGCGGATGACCCCGCACCGTTTCCGGCACACCCTGGCCACCGACTTGAT
GAAGGCACCCGAGCGGAACATCCACCTCACGAAGTGCCTGCTCAACCACTCGAATATCCAGACCACGATGAGCTACATCG
AGGCCGACTACGACCACATGCGTGCCGTGCTGCATGCCAGAAGCCTGGCCCAAGGAGCGCTGGAGAACGTCAGGAAGGTG
GATTACAGCGGCTCCCCGCAAGCCTCTGCCAAACCGAAGCCATGCGGGCAACCTCTCGCTCGAATGGGTGAAGCGCCGCC
ACAGGAGGCTAGGACAGAACCTGCAGAACCAAGGGAGCACACACCAGGGACAGGCATTCAGGGAGATGCAACCGCGTGGG
AAGAAGCGCTACCACAGCCACCTGACACCTTCGAGCAAAGAGTGCTGTTCACTCTGATGGCTCAACACCTATCGAACCGT
GCCGCCACGGCCTCCGCGGCTTCCACCGCAACAAGCGGATCTGGTGGATGGGGATCTACCGCCCGAAGCAGTCCCGCCTA
G

Protein sequence :
MTPQQLTEEYIFAHDLREASAKIYRAATKALLKHFGPTATVHDVDHRAVLGWRRKVLEQGLSKRSWNTYSNHLRTIWGYA
IEHELVTHSQVNPFRKTTVIPPRRASKTVAAEAILRARSWLNMQVGAERCTGDRARITPAWFWLCTFEVFYYTGIRLNAL
LCIRKRDIDWDNQLILIRGETEKTHKEFVVPITEGLVPHLSRLLQEADRAGFADDDQLFNVNRFSPHYKSKVMNSDQVEA
MYRKLTEKVAVRMTPHRFRHTLATDLMKAPERNIHLTKCLLNHSNIQTTMSYIEADYDHMRAVLHARSLAQGALENVRKV
DYSGSPQASAKPKPCGQPLARMGEAPPQEARTEPAEPREHTPGTGIQGDATAWEEALPQPPDTFEQRVLFTLMAQHLSNR
AATASAASTATSGSGGWGSTARSSPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13342.1 tyrosine recombinase xerC-like protein Not tested PAGI-5 Protein 0.0 100
xerC AAP82947.1 integrase Not tested PAPI-2 Protein 0.0 98
int ABD94670.1 putative integrase Not tested ExoU island A Protein 0.0 96
xerC AAP84129.1 integrase Not tested PAPI-1 Protein 0.0 96
xerC CAI36141.1 putative integrase XerC Not tested PPHGI-1 Protein 2e-93 51