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Name : PADK2_24045 (PADK2_24045) Accession : YP_006484774.1 Strain : Pseudomonas aeruginosa DK2 Genome accession: NC_018080 Putative virulence/resistance : Unknown Product : type IV secretory pathway, VirB4 component Function : - COG functional category : - COG ID : - EC number : - Position : 5166408 - 5169254 bp Length : 2847 bp Strand : + Note : COG3451 Type IV secretory pathway, VirB4 components DNA sequence : GTGGAAGAAGCGACTGAGCGCTATCTGGCGCGACTGGCCGCCATGGGTATCCCTTTACCCAACACCGGGAGCAAGAATGG CGCCACGCAGGCTGAAGCGTCACGCCTCTACGATCACGACCCATCGTTCGTCGACCTGCTGCCCTGGGCCGAGTACCTGC CCGACGAACAGGTGATGCTCCTGGAAGATGGACGTTCGCGTGCCGTCTTCTTCGAGCTGGTGCCCTTGGGCACCGAGGGT CGCGATCCCAATTGGATGCAGAACGCCCGGGACGCATTGAAAGAAGCCCTGCAGAACTCCTTCGACGAGCACGAAACCTC GCCCTGGATCGTCCAGTTCTACGCCCAGGACGAGATCAGCTGGGACAATTTCCAGGAGCAGTTGAGGCAGTACGTCCATC CTCGAGCGCGAGGATCAGCCTTCAGCGAGATGTACCTGGCGCTCATGAAGCATCACCTGGAGGGCATTTCGAAGCCGGGC GGACTGTTCGTCGACACCGCCGTCAGCAAGCTGCCCTGGCGAGGACAACAGCGGCGCGTGCGGATGGTCGTCTACCGCCG GATCCGCAAGGCGGATGCGCAGATTCGCGGACAGGACCCGGCGGCGTACCTGAAGTCCATCTGCGAGCGTATCCAAGGCG GCCTGGCGAACGCCGGCATCGTCGCTTCGCGCATGGGCGGACAGGAGATCAGGAACTGGTTGATCCGCTGGTTCAACCCG CACCCGGATCACCTCGGCAAGACCGATGCGGATCTACGTCGCTTCTACGAACTGGTATGCCGGCCGGACGAACCGATCCT GCAGGATGACTTGCCGCTGGCCGACGGCACCGACTTCTCCCAGAACCTGTTCTATCGGCAGCCTGTTTCCGATGCCACCC AGGGCGTATGGCTGTTCGATGCCATGCCACACCGAGTGATCGTGGTCGACCAGTTGAACAAGGCGCCGCTGACAGGGCAT TTCACCGGCGAGACGCTCAAGGGTGATGGCCTGAACGCCCTGTTCGATCGCATGCCCGAGGATACGCTGCTGTGTATCAC CATGGTGGTGACGCCGCAGGACATGCTGGAAGGGCATCTGCAGCAGCTCTCGAAAAAGGCCGTTGGTGACAACCAGGCCT CGATCCACACCCGCGAGGACGTGGCCACCGTTCGCCGCCTGATCGGCCGGGAGCACAAGCTCTATCGCGGTTCGATCGCT CTGTTCGTGCGCGGCCGCGACCATACCCAGTTGGAGGAGCGCTGCATCACCCTGAGCAACGTGCTGCTCGGCGCCGGCCT GGTGCCGGTCGAACCGCAGAACGAAGTGGGACCGCTGAACAGCTACCTGCGCTGGCTGCCCTGCAATTTCGATCCGAACG AAAAGCGAGCCCTGGAGTGGTACACCCAGATGATGTTCGCGCAGCACATCGCCAACCTGTCGCCCATCTGGGGGCGCACC ACCGGTACCGGACACCCCGGCTTCACGCTGTTCAACCGTGGCGGCGCGCCGTTGACCTTCGACCCGTTCAACAAGCTGGA CCGGCAGATGAATGCCCACGGCTTCATCTTCGGCCCAACCGGGTCCGGCAAGTCAGCGTCCCTGACCAACCTCATCAGCC AGATGCTCGCCATGTACCTGCCACGGATGTTCGTCGCGGAAGCGGGCAACAGCTTCGGCCTGCTGGCCGACTTCGCCAAG CGGTTTGGCCTCTCGGTCCACCGTGTCCGCCTCGCCCCGGGCTCCGGCGTCAGCCTGGCGCCGTTCGCGGACGCCATCAA GCTGGTCGAGAGTCCCGACCAGGTGAAGGTCCTGGATGCCGAAGACATCGAGGCCTCGGACTCGGTCCAGGGCAGCAAGG CCGACCTCGAGGACGATCAACGAGACATCCTCGGCGAGATGGAGATCGTCGCGCGCCTGATGATCACCGGCGGCGAAGAG AAGGAAGACGCGCGCCTGACCCGTGCCGATCGCAGCGCCATCCGCCAGGCGATTCTGGCGGCGGCCAGGACCTGCGCCGC CGCGAACCGCACGGTGCTCACCCAGGACGTGCGCGATGCGCTCTACGAGGCCTCCAGGAGCGATGGCTCCGCGCCAGAAC GGCGCGCGCGCCTGGCCGAAATGGCGGAAGCCATGCAGATGTTCTGCATGGGCGCCGACGGCGAGATGTTCAATCGCAAA GGCACGCCCTGGCCTGAAGCCGACCTCACCGTGGTGGATTTCGCGACTTACGCGCGCGAAGGCTACGCCGCCCAGCTCGG GATCGCCTACATCTCGCTGCTGAACACCGTAAACAACATCGCCGAACGCGACCAATTCAAGGGCCGGCCCATCGTCAAGA TCACCGATGAGGGACACATCATCACCAAGCACCCGCTGCTGCTGCCCTACGCCATGAAGATCACCAAGATGTGGCGGAAA CTGGGCGCCTGGTTCTGGCTCGCCACCCAGAACATCGACGACATCCCAGCCTCCGGGGCGCCGATGCTGAACATGATCGA GTGGTGGTTGTGCCTGAACATGCCCCCAGACGAGGTAGAGAAGATCTCCAGGTTCCGCGAGCTGTCGCCGGCGCAGAAGT CGATGATGCTCTCGGCCCGCAAGGAAAGCGGCAAATTCACCGAGGGCGTGCTCCTGGCCAAGGGCAAGGAGTACCTCTTC CGTGTGGTTCCCCCGAGTCTCTACCTGGCCCTGGCCATGACCGAAAACGAAGAAAAGAACCAGCGCTACAACATCATGCA AGCCACCGGCTGCGACGAGCTCGAGGCGGCCTTGCAGGTCGCAGCGGATCTCGACAAGGCGCGCGGCCTGCCGCCCTTCC CAATTAATTTCCCAGACCAACCGGCAGTGGAGTGCCAGGACGAATGA Protein sequence : MEEATERYLARLAAMGIPLPNTGSKNGATQAEASRLYDHDPSFVDLLPWAEYLPDEQVMLLEDGRSRAVFFELVPLGTEG RDPNWMQNARDALKEALQNSFDEHETSPWIVQFYAQDEISWDNFQEQLRQYVHPRARGSAFSEMYLALMKHHLEGISKPG GLFVDTAVSKLPWRGQQRRVRMVVYRRIRKADAQIRGQDPAAYLKSICERIQGGLANAGIVASRMGGQEIRNWLIRWFNP HPDHLGKTDADLRRFYELVCRPDEPILQDDLPLADGTDFSQNLFYRQPVSDATQGVWLFDAMPHRVIVVDQLNKAPLTGH FTGETLKGDGLNALFDRMPEDTLLCITMVVTPQDMLEGHLQQLSKKAVGDNQASIHTREDVATVRRLIGREHKLYRGSIA LFVRGRDHTQLEERCITLSNVLLGAGLVPVEPQNEVGPLNSYLRWLPCNFDPNEKRALEWYTQMMFAQHIANLSPIWGRT TGTGHPGFTLFNRGGAPLTFDPFNKLDRQMNAHGFIFGPTGSGKSASLTNLISQMLAMYLPRMFVAEAGNSFGLLADFAK RFGLSVHRVRLAPGSGVSLAPFADAIKLVESPDQVKVLDAEDIEASDSVQGSKADLEDDQRDILGEMEIVARLMITGGEE KEDARLTRADRSAIRQAILAAARTCAAANRTVLTQDVRDALYEASRSDGSAPERRARLAEMAEAMQMFCMGADGEMFNRK GTPWPEADLTVVDFATYAREGYAAQLGIAYISLLNTVNNIAERDQFKGRPIVKITDEGHIITKHPLLLPYAMKITKMWRK LGAWFWLATQNIDDIPASGAPMLNMIEWWLCLNMPPDEVEKISRFRELSPAQKSMMLSARKESGKFTEGVLLAKGKEYLF RVVPPSLYLALAMTENEEKNQRYNIMQATGCDELEAALQVAADLDKARGLPPFPINFPDQPAVECQDE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13362.1 | hypothetical protein | Not tested | PAGI-5 | Protein | 0.0 | 100 |
| RL022 | AAP84149.1 | conserved hypothetical protein | Not tested | PAPI-1 | Protein | 0.0 | 99 |
| EXA33 | ABD94642.1 | conserved hypothetical protein | Not tested | ExoU island A | Protein | 0.0 | 99 |
| virB4 | CAI36125.1 | VirB4 component | Not tested | PPHGI-1 | Protein | 0.0 | 68 |
| ORF SG57 | AAN62279.1 | hypothetical protein | Not tested | PAGI-3(SG) | Protein | 0.0 | 63 |
| ORF C47 | AAN62141.1 | hypothetical protein | Not tested | PAGI-2(C) | Protein | 0.0 | 62 |
| YE3482 | YP_001007641.1 | hypothetical protein | Not tested | YAPI | Protein | 0.0 | 50 |
| PMI2576 | YP_002152295.1 | hypothetical protein | Not tested | Not named | Protein | 0.0 | 50 |
| Pmu_03070 | YP_005176206.1 | conjugative transfer ATPase TraC-like, PFL family | Not tested | ICEPmu1 | Protein | 0.0 | 50 |
| STY4573 | NP_458658.1 | hypothetical protein | Not tested | SPI-7 | Protein | 3e-175 | 49 |
| YpsIP31758_3705 | YP_001402659.1 | hypothetical protein | Not tested | YAPI | Protein | 0.0 | 49 |
| api39 | CAF28513.1 | hypothetical protein | Not tested | YAPI | Protein | 0.0 | 48 |
