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Name : PADK2_23985 (PADK2_23985) Accession : YP_006484762.1 Strain : Pseudomonas aeruginosa DK2 Genome accession: NC_018080 Putative virulence/resistance : Unknown Product : DNA helicase Function : - COG functional category : - COG ID : - EC number : - Position : 5157875 - 5159356 bp Length : 1482 bp Strand : + Note : COG0210 Superfamily I DNA and RNA helicases DNA sequence : ATGCAGTGGACTCACGAACAGTCACCGATCATCCAGTCGAAGGCATCGAAGATCCTGGTGCGGGCCTTCGCCGGCACTGG CAAGACGACCACCCTGGTGGGCTTTGCCAAGGCGAACCCTACCCTGAGAATCCTCTATCTCTGCTACAACAGCTCGGTGG AGAAAGCCGCGAAGGGCAAGTTTCCCCGCAACGTAGTCTGCAAGACCGCCCACAGCCTGGCTCATGCGGTGTACGGCATC CAGTACGCCCACAAGAAGACGAAGAACCTGCGTCTGACCGATATCGCCCGCGGACTCGATACCCAAGACTGGGAGTTGGT ACGTGACGTGCTGGCCACGCTGAACAACTACATGGCCAGCGCCGACGCGGAACTCGGCCGACCGCACTTCCCGCGCTTCC GCGACAAGGCGTTCCTCACCAGTGCCCAGGAACGCTTCCTCAAGCAGGGCCTGGACATGGCGCGAGTAGTCTGGAGGCGC ATGGTCGACCTCCAGGACACCGGCATGCTGATGCCCCATGACGGCTACCTGAAGCTGTATCAACTGAGCAAGCCCGATTT GAGCCAGCGCTTCGACTGCATGCTCCTGGACGAGGGACAGGACATCAACCCAGTGATCGCGGACATTGCCCATTGGCAGC GCATCAGAATGGCTATCGTCGGCGATCCCCATCAGCAGCTCTACCGGTTCAGGGGCGCGGAAGATGCCCTGAACAGCGAC TGGATGGTCGGCGCCGAGGAGCACTACCTGACCCAGAGCTGGCGGTTCGGCCCCGCGATTGCGCACGTGGCCAACATCAT CCTCTCCTACAAGGGCGAGACACGGAAACTTCAAGGACTGGGCCCGCAGACGCTGGTGAAAAAGTCCCTCCCGGCGGACC TTCCTCACCGCACTTTCATTCACCGCACCGTTATCGGCGTCATCGAAAATGCCCTGCAGCGTGTGCGCAATAATCCGGCA CCCAAGTTCTACTGGGTAGGCGGTATCGACAGTTACTCGCTGCGCGACCTGGAGGACCTGTACGCATTCAGCCGAGGCCT GCACCAAAACGTCCAAAACAAGAAGCTGCTCCGTGACTACCGCGACTACACCCAGTACGTGGAGATCGCCGAGATCAGCC AGGACGGTGAAATGCTGCGCTCGATCAAGATCATCTCGACCTACCCTGATCTACCGGCGCGGATCCTCGAGCTTCGCTCA CTGACCCTTGACAATGAGCTGGACGCGACGATCACCCTGACCACCGCACATAAGGCCAAAGGGCTGGAATGGGATTTCGT TTGCCTGTACGACGACTTCAACGCGGATCCGCTGGCACCCGACACCGACCCGGGCAAGCGCGACGATGAGCTGAACCTGA TCTACGTCGCAGTGACCCGCGCGATGAAGATCCTCGCCATCAATAGCCTGGTGCTATCGATCATGCAGCGGTACGTGGAC GACAGAAAGCTGAAGGAGCAGATAGCTAGCTGTGAAAAATGA Protein sequence : MQWTHEQSPIIQSKASKILVRAFAGTGKTTTLVGFAKANPTLRILYLCYNSSVEKAAKGKFPRNVVCKTAHSLAHAVYGI QYAHKKTKNLRLTDIARGLDTQDWELVRDVLATLNNYMASADAELGRPHFPRFRDKAFLTSAQERFLKQGLDMARVVWRR MVDLQDTGMLMPHDGYLKLYQLSKPDLSQRFDCMLLDEGQDINPVIADIAHWQRIRMAIVGDPHQQLYRFRGAEDALNSD WMVGAEEHYLTQSWRFGPAIAHVANIILSYKGETRKLQGLGPQTLVKKSLPADLPHRTFIHRTVIGVIENALQRVRNNPA PKFYWVGGIDSYSLRDLEDLYAFSRGLHQNVQNKKLLRDYRDYTQYVEIAEISQDGEMLRSIKIISTYPDLPARILELRS LTLDNELDATITLTTAHKAKGLEWDFVCLYDDFNADPLAPDTDPGKRDDELNLIYVAVTRAMKILAINSLVLSIMQRYVD DRKLKEQIASCEK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EXA45 | ABD94654.1 | conserved hypothetical protein | Not tested | ExoU island A | Protein | 0.0 | 99 |
| unnamed | ABR13373.1 | hypothetical protein | Not tested | PAGI-5 | Protein | 0.0 | 99 |
| RL034 | AAP84161.1 | putative DNA helicase | Not tested | PAPI-1 | Protein | 0.0 | 98 |
| STY4664 | NP_458743.1 | putative DNA helicase | Not tested | SPI-7 | Protein | 2e-86 | 43 |
| t4355 | NP_807948.1 | DNA helicase | Not tested | SPI-7 | Protein | 2e-86 | 43 |
