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Name : PADK2_23775 (PADK2_23775) Accession : YP_006484720.1 Strain : Pseudomonas aeruginosa DK2 Genome accession: NC_018080 Putative virulence/resistance : Unknown Product : DNA topoisomerase I Function : - COG functional category : - COG ID : - EC number : - Position : 5115042 - 5116817 bp Length : 1776 bp Strand : + Note : COG0550 Topoisomerase IA DNA sequence : ATGCTCACCGTCGGCGTGGGCCAGGATTTCAAACCGCACTACCAGATCCTCTCGGGCAAGGAAAAAACCGTCGCACGGCT GAAGGAGCTGCGGCAGAAAGCCGTGGAAATCTACGTCGCCTCCGACCCGGATCGCGAAGGCGAAAGCATCGGCTGGCACA TCCTCCAGGCTGCCGGGATCAAGAACTACAAGCGCGTTGCCTTCAAGGAAATCACCAAGTCGTGCATCAGCGCCGAACTC AGCTCGCCGCGCCACCTGGACCTCCCGAAAGTCGCCTCGCAGGAATGCCGTCGCGTCATCGATCGCCTGGTGGGGTATCT GGTCACGCCAGAGCTGCGGCGCGTGATGGGTAGGCCAACCACCGCCGGGCGCGTGCAGTCCGTCGCCGTGTACCTGGTGG TCCTGCGAGAGCGGGAGATTCACGCCTTCACAGCAATCAAGCATTTCGGGGTGGAACTGGGCTTCGTTTCGCCAAGCGAC GGCCGTACCTGGAAGGCGGAGTGGGATCCAGTGCCCACGTTTGCCAGCAAGGAGTTCCCGTATGTCCAGGATCGTCAACT TGCAGAACTGGTGGGGGCTATACGCAATGTGATCGTCGAGACCTGCATTGATGGCGAAGAAACCGATACGCCTCCGGCGC CGTTCATCTCCTCTTCGCTCCAGATGGCAGCCGGGAATGCACTGAAGTGGTCACCCGACAAGACGATGAAGATCGCCCAG CGGCTGTATGAACAGGGGCTCATCACCTACCACCGGACGGACAACCCCAATATTTCGAAGGACTCGATGCCGGATATCCG TGCTGTCGCCAAGGCCTTGGGCCTGAAGTGCGTTGAGCAACAGCGGATGTTCAAGGCTGACCAGGACGCCCAGGAAGGCC ACCCCGCCATCACCCCTACCGACTGGATGGCCGCTACCGCCGGTGAAACTGCTGATGAGCAGGCGCTGTACCAGCTCATT CGAGTTCGCGCGCTTGCCAGCCAGATCGAAGCTGCCGTGTACGCAGTGCGAACCATCACCCTCCTGGGCGTCGGCCCCGA CAAAAAGCCGCTGCGCTTCGGCGCCAAAGGGAAGCTGTTGAACGTGCCTGGCTGGAGAAAACTGCTGCAGGGCGATGATG CCGAGGAGCAAAAGAACGAAACGCCCTCAAACCCCATCCCGGCGCTGGAGCCAGGCCAGATCCTCAAGGTCTACAGCGGC GAGGTCCTGGAGAAGAAAACCACCCCTCCCAAGCGATTTACCGATGCCAGCCTGGTGGGCGAAATGAAGCGCCGCGGGAT TGGTCGGCCATCCTCCTACGCCTCGATCGTGAAGAACATCATCGACAAGGGCCTGGTGCAGATGAAGGGCCGAAGCCTGA TCCCCGGCGAGCTGGGAGAGGCCACCATCGCGCTCCTGGAGCACAACTTCAGCTTCCTCAGCCTCGACTTCACCCGCAAC CTCGAGGTCGCCTTGGACCGGATCGCCAACAGCGAGGACACCTACATGAACGTGGTCCAGCAGTTCTACCAGCTACTACA GACAGAGCTGCAGACACTCCGCGCGCTCCCTAGCGCACAGGACGAACCACGCGAAAGCTCCACTGCCAGTATCTCCTCGG CGCCGACCAGCGACTTCCTTTGTGGCAAGTGCGGTCTGCCCCTGGTTCACCGCAAGAAAGCCGGCAAGGGCGGCTTCGAC TTCTGGGGTTGCAGCGGCTATCGCACCATAGGGTGCAAGGTCAGCTACCCCAGCAAGAGCGGCCGACCTGACTTCGACAA CCCGCGCGGGCTATAG Protein sequence : MLTVGVGQDFKPHYQILSGKEKTVARLKELRQKAVEIYVASDPDREGESIGWHILQAAGIKNYKRVAFKEITKSCISAEL SSPRHLDLPKVASQECRRVIDRLVGYLVTPELRRVMGRPTTAGRVQSVAVYLVVLREREIHAFTAIKHFGVELGFVSPSD GRTWKAEWDPVPTFASKEFPYVQDRQLAELVGAIRNVIVETCIDGEETDTPPAPFISSSLQMAAGNALKWSPDKTMKIAQ RLYEQGLITYHRTDNPNISKDSMPDIRAVAKALGLKCVEQQRMFKADQDAQEGHPAITPTDWMAATAGETADEQALYQLI RVRALASQIEAAVYAVRTITLLGVGPDKKPLRFGAKGKLLNVPGWRKLLQGDDAEEQKNETPSNPIPALEPGQILKVYSG EVLEKKTTPPKRFTDASLVGEMKRRGIGRPSSYASIVKNIIDKGLVQMKGRSLIPGELGEATIALLEHNFSFLSLDFTRN LEVALDRIANSEDTYMNVVQQFYQLLQTELQTLRALPSAQDEPRESSTASISSAPTSDFLCGKCGLPLVHRKKAGKGGFD FWGCSGYRTIGCKVSYPSKSGRPDFDNPRGL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| topA | AAP84217.1 | topoisomerase I | Not tested | PAPI-1 | Protein | 0.0 | 97 |
| unnamed | ABR13436.1 | DNA topoisomerase I | Not tested | PAGI-5 | Protein | 0.0 | 96 |
| top | ACP28824.1 | DNA topoisomerase I | Not tested | AbaR5 | Protein | 2e-103 | 45 |
| topA | ADI24145.1 | DNA topoisomerase I | Not tested | AbaR1 | Protein | 2e-103 | 45 |
