Gene Information

Name : PADK2_02015 (PADK2_02015)
Accession : YP_006480400.1
Strain : Pseudomonas aeruginosa DK2
Genome accession: NC_018080
Putative virulence/resistance : Resistance
Product : cystathionine gamma-lyase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 436014 - 437198 bp
Length : 1185 bp
Strand : +
Note : COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases

DNA sequence : 
ATGAGCCAGCACGACCAGCATCCCGACGCCCCGGCCCAGGCCTTTGCGACCCGGGTCATCCACGCCGGGCAGGCCCCCGA
TCCCTCGACCGGCGCGATCATGCCGCCGATCTACGCCAACTCCACCTATATCCAGGAAAGCCCCGGGGTACACAAGGGGC
TCGACTACGGCCGCTCGCACAACCCGACCCGCTGGGCCCTGGAGCGCTGCGTGGCCGACCTCGAGGGCGGCGCCCAGGCC
TTCGCCTTCGCCTCCGGCCTGGCGGCGATCTCCTCGGTGCTGGAGCTGCTCGACGCCGGTTCCCACATCGTTTCCGGCAA
TGACCTCTACGGCGGTACCTTCCGCCTGTTCGAGCGGGTCCGCCGGCGCAGCGCCGGGCATCGCTTCAGCTTCGTCGACC
CGACCGACCTGCAGGCCTTCGAGGCCGCGCTGACCCCGGAAACCCGCATGGTCTGGGTGGAAACCCCGAGCAACCCGCTG
CTGCGCCTCACCGACCTGCGCGCCATCGCCCAGCTCTGCCGCGCCCGCGGCATCATCAGCGTGGCCGACAACACCTTCGC
CAGCCCCTATATCCAGCGCCCCCTGGAACTGGGCTTCGACGTGGTGGTGCACTCCACCACCAAGTACCTGAACGGCCATT
CCGACGTGATCGGCGGCATCGCCATCGTCGGCGACAACCCGGACCTGCGCGAGCGCCTGGGCTTCCTGCAGAACTCGGTG
GGCGCCATCTCCGGGCCGTTCGACGCCTTCCTCACCCTGCGTGGGGTGAAGACCCTGGCGCTGCGCATGGAGCGCCATTG
CAGCAACGCCCTGGCCCTGGCCCAGTGGCTGGAGCGCCAGCCGCAGGTGGCGCGGGTCTACTACCCCGGCCTGGCTTCGC
ACCCGCAGCATGAGCTGGCGAAACGGCAGATGCGTGGCTTCGGCGGGATGATCTCCCTCGACCTGCGTTGCGACCTGGCC
GGCGCCCGGCGCTTCCTGGAGAACGTGCGGATCTTCTCCCTGGCGGAGAGCCTGGGCGGGGTGGAAAGCCTGATCGAGCA
TCCGGCGATCATGACCCACGCCAGCATCCCGGCGGAAACCCGTGCCGAACTGGGCATCGGTGACTCGCTGATCCGCCTGT
CGGTGGGCGTCGAGGCGCTGGAGGACCTGCAGGCCGACCTGGCGCAGGCGCTGGCGAAGATCTGA

Protein sequence : 
MSQHDQHPDAPAQAFATRVIHAGQAPDPSTGAIMPPIYANSTYIQESPGVHKGLDYGRSHNPTRWALERCVADLEGGAQA
FAFASGLAAISSVLELLDAGSHIVSGNDLYGGTFRLFERVRRRSAGHRFSFVDPTDLQAFEAALTPETRMVWVETPSNPL
LRLTDLRAIAQLCRARGIISVADNTFASPYIQRPLELGFDVVVHSTTKYLNGHSDVIGGIAIVGDNPDLRERLGFLQNSV
GAISGPFDAFLTLRGVKTLALRMERHCSNALALAQWLERQPQVARVYYPGLASHPQHELAKRQMRGFGGMISLDLRCDLA
GARRFLENVRIFSLAESLGGVESLIEHPAIMTHASIPAETRAELGIGDSLIRLSVGVEALEDLQADLAQALAKI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-73 47
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 9e-75 47
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 5e-51 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PADK2_02015 YP_006480400.1 cystathionine gamma-lyase BAC0207 Protein 1e-67 46