Gene Information

Name : PADK2_17250 (PADK2_17250)
Accession : YP_006483431.1
Strain : Pseudomonas aeruginosa DK2
Genome accession: NC_018080
Putative virulence/resistance : Virulence
Product : translocation protein in type III secretion
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3728965 - 3730014 bp
Length : 1050 bp
Strand : +
Note : COG4792 Type III secretory pathway, component EscU

DNA sequence : 
ATGAGCGCCGAGAAGACCGAGCAGCCCACGGCGAAGAAGCTGCGCGACGCCCGCCGGCAGGGCCAGGTGGTGAAGAGCAA
GGAAATTGTCTCCAGCGCGTTGATCCTGTCGCTGGTGGCGCTGCTGATGGGCTTTTCCGACTACTACCTGGAGCATCTCG
GCAAGCTGCTCCTGCTGCCCGCCGAGTACATCGACCTGCCGTTTCGCCAGGCGCTGGAGACCATCCTGGAGAACCTTCTC
CAGGAACTCCTCTACCTGCTGGCGCCGGTCCTGCTGGTCGCGGCGCTGGTGGTGGTGCTCAGCCATGTCGGCCAGTACGG
CTTCCTGCTCAGCCTCGACAGCGTCAAGCCGGACCTGAAGAAGATCAACCCGGTGGAGGGCGCGAAGAAGATCTTCTCGA
TCCGGAGCCTGGTGGAGTTCCTCAAGTCGACCCTGAAGGTCGCCCTGCTCTCCCTGCTGGTCTGGCTGACCTTGCAGGGC
AACCTGGCCAGCCTCCTGCGGATTCCCGCCTGCGGGCTGGACTGCGTGGCACCGGTGAGCGGGCTGATGCTCAGGCAACT
GATGCTGGTCTGCGCGGTCGGCTTCCTGGCGATTGCCGTCGCCGACTACGCCTTCGAACGCCACCAGCACTACAAGCAGT
TGCGCATGAGCAAGGACGAAGTGAAGCGCGAGTACAAGGAGATGGAGGGCAGTCCGGAGATCAAGAGCAAGCGCCGGCAA
TTCCATCAGGAACTGCAATCGAGCAATCTGCGCGCGGATGTCCGGCGCTCCTCGGTGATCGTCGCCAACCCGACCCACGT
CGCCATCGGCATACGCTATCGACGCGGCGAAACGCCCCTGCCGCTGGTCACCCTGAAGCACACCGACGCCCTGGCCCTGC
GGGTCCGGCGCATCGCCGAGGAAGAAGGAATCCCAGTGCTGCAACGAATTCCGCTGGCACGGGCGCTGCTGCGCGACGGC
AATGTCGACCAGTACATACCGGCGGACCTGATCCAGGCCACCGCCGAAGTCCTGCGCTGGCTGGAAAGCCAGCAGACGGA
TACGCCCTGA

Protein sequence : 
MSAEKTEQPTAKKLRDARRQGQVVKSKEIVSSALILSLVALLMGFSDYYLEHLGKLLLLPAEYIDLPFRQALETILENLL
QELLYLLAPVLLVAALVVVLSHVGQYGFLLSLDSVKPDLKKINPVEGAKKIFSIRSLVEFLKSTLKVALLSLLVWLTLQG
NLASLLRIPACGLDCVAPVSGLMLRQLMLVCAVGFLAIAVADYAFERHQHYKQLRMSKDEVKREYKEMEGSPEIKSKRRQ
FHQELQSSNLRADVRRSSVIVANPTHVAIGIRYRRGETPLPLVTLKHTDALALRVRRIAEEEGIPVLQRIPLARALLRDG
NVDQYIPADLIQATAEVLRWLESQQTDTP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscU AAO18037.1 LscU Virulence TTSS locus Protein 8e-90 71

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PADK2_17250 YP_006483431.1 translocation protein in type III secretion VFG0185 Protein 9e-121 100
PADK2_17250 YP_006483431.1 translocation protein in type III secretion VFG0397 Protein 3e-87 67