Gene Information

Name : PADK2_17245 (PADK2_17245)
Accession : YP_006483430.1
Strain : Pseudomonas aeruginosa DK2
Genome accession: NC_018080
Putative virulence/resistance : Virulence
Product : translocation protein in type III secretion
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3728180 - 3728968 bp
Length : 789 bp
Strand : +
Note : COG4791 Type III secretory pathway, component EscT

DNA sequence :
ATGAGCGTCCAGGACCTGCAGCAACTGCTGCTGACCTACAGCCTGCTGCTGCCGCGGATCATCAGTTGCTTCGTGGTCCT
ACCGGTGCTGGCCAAGCAAACCCTGGGCGGCGGCCTGGTGCGCAACGGCGTGGCCTGCTCGCTGGCGCTGTTCGCCTACC
CGATCGTCGCCGGCAGCCTGCCGCCGGCCCTCGACGCGCTGGACATCGCCCTGCTGATCGGCAAGGAAGTGCTGCTCGGC
CTGCTCATCGGCTTCGTCGCCACCATTCCCTTCTGGGCCATGGAAGCGACCGGCTTCATCATCGACAACCAGCGTGGCGC
GGCACTCGCCTCGACCCTCAACCCCAGCCTGGGCAGCCAGACCAGCCCCACCGGGCTGTTGCTGACGCAGACGCTGATCA
CCCTGTTCTTCTCCGGCGGCGCCTTCCTCGCGCTGGTCGGCTCGCTGTTCAGGAGCTATGCCAGTTGGCCGGTGAGCAGC
TTCTTCCCGCAGTTCGGCAGCCAATGGGTGGAGTTCTTCTACGCGCAGTTCTCGCAGATGCTGATGCTCTGCGCGCTGTT
CGCCGCGCCGCTGCTGATTGCCATGTTCCTCGCCGAGTTCGGCCTGGCGCTGGTCAGCCGCTTCGCCCCGTCGCTGAACG
TGTTCATCCTCGCCATGCCGATCAAGAGCCTGGTGGCCAGCCTGCTGCTGGTGCTCTACCTGGGCATCCTCATGGAGCAC
GCCTACGATGCCCTGCTGCTCGCCGTCGACCCGCTGCGCCTGCTGCGTCCCGTGCTGGAGACGCCATGA

Protein sequence :
MSVQDLQQLLLTYSLLLPRIISCFVVLPVLAKQTLGGGLVRNGVACSLALFAYPIVAGSLPPALDALDIALLIGKEVLLG
LLIGFVATIPFWAMEATGFIIDNQRGAALASTLNPSLGSQTSPTGLLLTQTLITLFFSGGAFLALVGSLFRSYASWPVSS
FFPQFGSQWVEFFYAQFSQMLMLCALFAAPLLIAMFLAEFGLALVSRFAPSLNVFILAMPIKSLVASLLLVLYLGILMEH
AYDALLLAVDPLRLLRPVLETP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscT AAO18038.1 LscT Virulence TTSS locus Protein 6e-60 79

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PADK2_17245 YP_006483430.1 translocation protein in type III secretion VFG0186 Protein 2e-67 99
PADK2_17245 YP_006483430.1 translocation protein in type III secretion VFG0396 Protein 5e-55 73