Gene Information

Name : PADK2_17230 (PADK2_17230)
Accession : YP_006483427.1
Strain : Pseudomonas aeruginosa DK2
Genome accession: NC_018080
Putative virulence/resistance : Virulence
Product : type III secretion system protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3726335 - 3727264 bp
Length : 930 bp
Strand : +
Note : COG1886 Flagellar motor switch/type III secretory pathway protein

DNA sequence : 
ATGAACGGTACGGACCTCGACCTGCCGCTCGCCAGCCGCGCCGAACTGGATCTCCAGCGACGTCTCGCACGTTGCCGTCG
CCACTATGTCGGCAACGCTTTGCAAGCGCGCCTGGACATCGCCCAGGCCGCCCCCGACGTCGATCTCGAACTGAGCCTGG
CGTGGGACGGCCTGCCCCTGCGCTTTCTCTGCCAGGCCCCGGCGCTGGCCCGCTGGCTCGCGCCGAACCTGCAGGAGGCA
GCCTTCGCCAGCCTGCCGGCGGCCCTGCAACTGGCCTTGCTGGAGCGCGAAGGCAACGTCTTTCCCGGCCTGGTCTGGTA
CGGCCTGAGCCCGGCGCAACCACGCGCTGCGATGGGCCTGCGCCTGAGCCTGGAACGCGACGACCAGCGCCTGGCGCTCT
GGCTCGACGGCGATCCCGCGACGCTGCTGGCACGCCTGCCGCCGCGCCCCTCGGCGCAACGCCTGGCCATACCGCTGCGC
CTGTCGCTGCAATGGCCCGGCCTGCCGCTGGAGGCCGGCGAGCTGCGCACCCTGGAGCCCGGCGACCTGTTGCTGCTGCC
TGCCGGCCATCGCCCCGACGCAGCGCTGCTGGGGGTTCTCGAAGGACGCCCCTGGGCGCGCTGCCAACTCCACTCCACGC
AACTGGAACTGCTCGACATGCACGACATCCCCTCCCTCGCCGACAGCGAGGACCTGCACGAACTCGACCAACTGCCGATC
CCGGTCAGCTTCGAGGTCGGCCGCCGCACCCTGGACCTGCATACCCTCTCCACCCTGCAGCCAGGCTCGCTGCTCGATCT
CGACAGTGCCCTGGACGGCGAAGTGCGCATCCTCGCCAACCAGCGCTGCCTCGGTATCGGCGAACTGGTCAGGCTCCAGG
ACCGGCTCGGGGTGCGCGTAACCCGCCTGTTCGGACACGACGAAGCATGA

Protein sequence : 
MNGTDLDLPLASRAELDLQRRLARCRRHYVGNALQARLDIAQAAPDVDLELSLAWDGLPLRFLCQAPALARWLAPNLQEA
AFASLPAALQLALLEREGNVFPGLVWYGLSPAQPRAAMGLRLSLERDDQRLALWLDGDPATLLARLPPRPSAQRLAIPLR
LSLQWPGLPLEAGELRTLEPGDLLLLPAGHRPDAALLGVLEGRPWARCQLHSTQLELLDMHDIPSLADSEDLHELDQLPI
PVSFEVGRRTLDLHTLSTLQPGSLLDLDSALDGEVRILANQRCLGIGELVRLQDRLGVRVTRLFGHDEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscQ AAO18041.1 LscQ Virulence TTSS locus Protein 2e-44 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PADK2_17230 YP_006483427.1 type III secretion system protein VFG0189 Protein 2e-109 99