Gene Information

Name : PADK2_17210 (PADK2_17210)
Accession : YP_006483423.1
Strain : Pseudomonas aeruginosa DK2
Genome accession: NC_018080
Putative virulence/resistance : Virulence
Product : Type III secretion outer membrane protein PopN precursor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3722380 - 3723246 bp
Length : 867 bp
Strand : -
Note : -

DNA sequence : 
ATGGACATCCTCCAGAGTTCCTCCGCCGCGCCCCTCGCGCCGCGGGAAGCGGCCAACGCCCCCGCGCAGCAGGCTGGCGG
CAGCTTCCAGGGCGAGCGCGTCCACTACGTTTCCGTTTCGCAGTCGCTGGCCGATGCCGCGGAAGAGCTGACCTTCGCCT
TTTCCGAGCGCGCCGAGAAATCCCTGGCCAAGCGCCGCCTGAGCGACGCCCATGCGCGCCTGAGCGAAGTCCAGGCCATG
CTGCAGGAGTACTGGAAGCGCATTCCGGACCTGGAAAGCCAGCAGAAGCTCGAGGCGCTGATCGCCCACCTGGGCAGCGG
TCAACTGAGCAGCCTGGCGCAGCTCAGCGCTTACCTGGAGGGCTTCTCCAGCGAGATCAGCCAGCGCTTCCTGGCGCTGT
CGCGGGCGCGCGACGTCCTGGCCGGGCGGCCGGAGGCGCGGGCGATGCTGGCGCTGGTCGACCAGGCGTTGCTGCGGATG
GCCGACGAGCAGGGCCTGGAGATCGAACTCGGCCTGCGCATCGAGCCGCTGGCCGCCGAGGCTTCCGCCGCCGGTGTCGG
CGATATCCAGGCGCTGCGCGATACCTACCGTGACGCGGTACTCGACTACCGGGGCCTGTCGGCGGCCTGGCAGGACATCC
AGGCGCGCTTCGCCGCGACGCCGCTGGAGCGGGTCGTGGCCTTCCTGCAGAAAGCCCTGAGCGCCGACCTGGACAGTCAG
TCGAGCCGGCTCGATCCGGTGAAGCTGGAGCGGGTCATGAGCGACATGCACAAGCTGCGCGTGCTCGGCGGCCTGGCGGA
GCAGGTGGGGGCGCTCTGGCAGGTGCTGGTGACGGGGGAGCGGGGCCATGGCATACGGGCCTTCTGA

Protein sequence : 
MDILQSSSAAPLAPREAANAPAQQAGGSFQGERVHYVSVSQSLADAAEELTFAFSERAEKSLAKRRLSDAHARLSEVQAM
LQEYWKRIPDLESQQKLEALIAHLGSGQLSSLAQLSAYLEGFSSEISQRFLALSRARDVLAGRPEARAMLALVDQALLRM
ADEQGLEIELGLRIEPLAAEASAAGVGDIQALRDTYRDAVLDYRGLSAAWQDIQARFAATPLERVVAFLQKALSADLDSQ
SSRLDPVKLERVMSDMHKLRVLGGLAEQVGALWQVLVTGERGHGIRAF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lopN AAO18045.1 LopN Virulence TTSS locus Protein 5e-74 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PADK2_17210 YP_006483423.1 Type III secretion outer membrane protein PopN precursor VFG0193 Protein 2e-111 100
PADK2_17210 YP_006483423.1 Type III secretion outer membrane protein PopN precursor VFG0389 Protein 8e-50 49