Gene Information

Name : PADK2_17160 (PADK2_17160)
Accession : YP_006483413.1
Strain : Pseudomonas aeruginosa DK2
Genome accession: NC_018080
Putative virulence/resistance : Virulence
Product : translocator protein PopB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3715633 - 3716697 bp
Length : 1065 bp
Strand : -
Note : COG5613 Uncharacterized conserved protein

DNA sequence : 
GTGGAGCGCCTGGCGGCGCCGGCCGCGGCTTCCGCGAGCGGCACGGGGGTGGCGCTGACGCCGCCGTCCGCAGCCAGCCA
GCAGCGCCTGGAGGTCGCCAATCGTGCGGAGATCGCCAGCCTGGTGCAAGCAGTGGGCGAGGATGCCGGACTGGCGCGGC
AGGTTGTGCTGGCCGGCGCTTCGACGCTGTTGTCCGCCGGCCTGATGTCGCCGCAGGCGTTCGAGATCGAGCTGGCGAAA
ATCACCGGCGAAGTCGAGAACCAGCAGAAGAAACTCAAGCTGACCGAAATCGAGCAGGCGCGAAGGCAGAACCTGCAGAA
GATGGAGGGCAACCAGCAGAAGATCAGGGAATCGGAAGAAGCCGCGAAAGAAGCTCAGAAGTCCGGTCTGGCAGCCAAAA
TCTTTGGTTGGATCAGTGCAATAGCTTCGATCATCGTCGGCGCAATCATGGTGGCAACCGGCGTCGGCGCGGCCGCGGGT
GCACTGATGATCGCGGGCGGTGTCATGGGAGTGGTCTCCCAGTCGGTACAGCAGGCAGCCGCGGACGGATTGATCAGCAA
GGAAGTGATGGAAAAGCTCGGCCCGGCACTGATGGGTATCGAGATCGCCGTCGCGCTGCTGGCGGCGGTGGTCAGCTTCG
GCGGCTCAGCGGTCGGCGGGCTGGCCAAGCTGGGCGCGAAGATCGGCGGCAAGGCGGCCGAGATGACCGCCAGCCTGGCG
AGCAAGGTCGCCGACCTGGGCGGCAAGTTCGGCAGTTTGGCCGGCCAATCGCTGTCGCACTCGCTGAAACTCGGCGTGCA
GGTTTCCGACCTGACCCTGGACGTCGCCAACGGCGCGGCCCAGGCCACTCATTCGGGATTCCAGGCGAAGGCCGCGAACC
GCCAGGCCGACGTGCAGGAATCGCGTGCCGACCTGACCACCCTGCAGGGCGTGATCGAGCGCCTGAAGGAAGAGCTGAGC
CGCATGCTGGAAGCATTCCAGGAAATCATGGAGCGGATCTTCGCCATGCTCCAGGCCAAGGGTGAAACCCTTCACAACCT
GTCCAGCCGACCGGCAGCGATCTGA

Protein sequence : 
MERLAAPAAASASGTGVALTPPSAASQQRLEVANRAEIASLVQAVGEDAGLARQVVLAGASTLLSAGLMSPQAFEIELAK
ITGEVENQQKKLKLTEIEQARRQNLQKMEGNQQKIRESEEAAKEAQKSGLAAKIFGWISAIASIIVGAIMVATGVGAAAG
ALMIAGGVMGVVSQSVQQAAADGLISKEVMEKLGPALMGIEIAVALLAAVVSFGGSAVGGLAKLGAKIGGKAAEMTASLA
SKVADLGGKFGSLAGQSLSHSLKLGVQVSDLTLDVANGAAQATHSGFQAKAANRQADVQESRADLTTLQGVIERLKEELS
RMLEAFQEIMERIFAMLQAKGETLHNLSSRPAAI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lopB AAO18055.1 LopB Virulence TTSS locus Protein 9e-41 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PADK2_17160 YP_006483413.1 translocator protein PopB VFG0203 Protein 2e-91 99
PADK2_17160 YP_006483413.1 translocator protein PopB VFG0379 Protein 6e-29 43