Gene Information

Name : PADK2_17155 (PADK2_17155)
Accession : YP_006483412.1
Strain : Pseudomonas aeruginosa DK2
Genome accession: NC_018080
Putative virulence/resistance : Virulence
Product : translocator outer membrane protein PopD precursor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3714734 - 3715621 bp
Length : 888 bp
Strand : -
Note : -

DNA sequence : 
ATGATCGATACGCAATATTCCCTGGCGGCTACCCAGGCCGCGATCCCCTCCGAGCCGATCGCTCCCGGCGCCGCCGGGCG
TTCCGTCGGCACGCCGCAAGCGGCTGCGGAGCTGCCGCAGGTGCCGGCCGCGCGGGCCGACCGGGTCGAACTGAACGCTC
CGCGCCAGGTGCTCGACCCGGTGCGCATGGAAGCGGCCGGCAGCGAGCTGGACAGCAGCGTCGAGCTTCTGCTGATTCTC
TTCCGCATCGCGCAGAAGGCGCGCGAGCTGGGCGTGCTCCAGCGCGACAACGAGAACCAGGCGATCATCCACGCGCAGAA
GGCGCAGGTGGACGAGATGCGCAGCGGCGCCACGCTGATGATCGCCATGGCGGTGATCGCCGGCGTCGGCGCATTGGCCT
CGGCGGTGGTCGGCAGCCTCGGCGCGTTGAAGAACGGCAAGGCCATCAGTCAAGAGAAGACCCTGCAGAAGAACATCGAT
GGGCGCAACGAACTGATCGACGCGAAGATGCAGGCGCTTGGCAAGACCTCCGACGAGGATCGCAAGATCGTCGGCAAGGT
CTGGGCGGCGGACCAGGTGCAGGACAGTGTGGCGTTGCGTGCGGCGGGCCGTGCCTTCGAGAGCCGCAACGGCGCCCTGC
AGGTGGCCAACACGGTGATCCAGTCCTTCGTCCAGATGGCCAACGCCTCGGTCCAGGTGCGCCAGGGCGAGTCGCAGGCG
AGCGCCCGGGAAGAGGAGGTCAACGCCACCATCGGGCAGAGCCAGAAGCAGAAGGTCGAGGACCAGATGAGCTTCGATGC
CGGCTTCATGAAGGACGTCCTGCAGCTCATCCAGCAGTACACCCAGAGCCATAACCAGGCCTGGCGTGCGGCGGCCGGAG
TGGTCTGA

Protein sequence : 
MIDTQYSLAATQAAIPSEPIAPGAAGRSVGTPQAAAELPQVPAARADRVELNAPRQVLDPVRMEAAGSELDSSVELLLIL
FRIAQKARELGVLQRDNENQAIIHAQKAQVDEMRSGATLMIAMAVIAGVGALASAVVGSLGALKNGKAISQEKTLQKNID
GRNELIDAKMQALGKTSDEDRKIVGKVWAADQVQDSVALRAAGRAFESRNGALQVANTVIQSFVQMANASVQVRQGESQA
SAREEEVNATIGQSQKQKVEDQMSFDAGFMKDVLQLIQQYTQSHNQAWRAAAGVV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lopD AAO18056.1 LopD Virulence TTSS locus Protein 3e-57 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PADK2_17155 YP_006483412.1 translocator outer membrane protein PopD precursor VFG0204 Protein 2e-122 99
PADK2_17155 YP_006483412.1 translocator outer membrane protein PopD precursor VFG0378 Protein 4e-39 41