Gene Information

Name : PADK2_17100 (PADK2_17100)
Accession : YP_006483401.1
Strain : Pseudomonas aeruginosa DK2
Genome accession: NC_018080
Putative virulence/resistance : Virulence
Product : type III export protein PscF
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3707448 - 3707705 bp
Length : 258 bp
Strand : -
Note : -

DNA sequence : 
ATGGCGCAGATATTCAACCCCAACCCGGGGAATACCCTCGATACCGTGGCCAATGCCCTGAAGGAGCAGGCCAACGCAGC
GAACAAGGACGTCAACGAAGCGATCAAGGCCTTGCAGGGGACCGACAATGCCGATAACCCGGCGCTGCTGGCCGAGCTGC
AACACAAGATCAACAAGTGGTCGGTCATCTACAACATCAACTCGACGGTGACCCGTGCGCTGCGCGACCTGATGCAAGGC
ATCCTGCAGAAGATCTGA

Protein sequence : 
MAQIFNPNPGNTLDTVANALKEQANAANKDVNEAIKALQGTDNADNPALLAELQHKINKWSVIYNINSTVTRALRDLMQG
ILQKI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscF AAO18031.1 LscF Virulence TTSS locus Protein 3e-23 73

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PADK2_17100 YP_006483401.1 type III export protein PscF VFG0214 Protein 2e-33 99
PADK2_17100 YP_006483401.1 type III export protein PscF VFG0405 Protein 3e-19 68