Gene Information

Name : PADK2_17085 (PADK2_17085)
Accession : YP_006483398.1
Strain : Pseudomonas aeruginosa DK2
Genome accession: NC_018080
Putative virulence/resistance : Virulence
Product : type III export protein PscI
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3706332 - 3706655 bp
Length : 324 bp
Strand : -
Note : -

DNA sequence : 
ATGGGCGCCCAGGCGCAGATCACCAGTCTCGAAGAACTCTCCGGCGGCCCGGCCGGCGCGGCCCACGTCGCCGAGTTCGA
ACGGGCGATGGGCGGTGCCGGCAGCCTGGGCGGCGACCTGCTCAGCGAACTGGGGCAGATCAGGGAGCGTTTCAGCCAGG
CCAAGCAGGAGTTGCAGGTGGAGCTGTCGACGCCCGGCGACGATCCCAACAGCCTGATGCAGATGCAGTGGTCGCTGATG
CGCATCACCATGCAGGAAGAGCTGATCGCCAAGACCGTCGGGCGCATGAGCCAGAACGTCGAAACCCTGATGAAGACCCA
ATGA

Protein sequence : 
MGAQAQITSLEELSGGPAGAAHVAEFERAMGGAGSLGGDLLSELGQIRERFSQAKQELQVELSTPGDDPNSLMQMQWSLM
RITMQEELIAKTVGRMSQNVETLMKTQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscI AAO18028.1 LscI Virulence TTSS locus Protein 8e-25 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PADK2_17085 YP_006483398.1 type III export protein PscI VFG0217 Protein 1e-35 99
PADK2_17085 YP_006483398.1 type III export protein PscI VFG0408 Protein 8e-17 47