Gene Information

Name : PADK2_17070 (PADK2_17070)
Accession : YP_006483395.1
Strain : Pseudomonas aeruginosa DK2
Genome accession: NC_018080
Putative virulence/resistance : Virulence
Product : type III secretion system protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3704337 - 3704921 bp
Length : 585 bp
Strand : -
Note : COG1317 Flagellar biosynthesis/type III secretory pathway protein

DNA sequence :
TTGCGCGCCCGCGACTACCAGGACTACCTCAGCGCCAACCGCCTGGTGGAAGCGGCACGCGAGCGTGCCGCCGAAATCGA
GCGCGAGGCTCACGAGGTTTACCAGGAGCAGAAGCGCCTGGGCTGGGAGGCCGGACTGGAGGAGGCGCGTCTGCGCCAGG
CCGGGCTGATCCAGGAAACGCTACTGCGCTGCAATCGCTACTACCGGCAGGTCGATCGCCAGCTTGGCGAGGTGGTGCTG
CAGGCGGTGCGCAAGGTGTTGCGCCACTACGACGCTGTCGAGCTGACCCTGGCGGCCACGCGCGAGGCACTGGCATTGGT
GAGCAACCAGAAGCAGGTGATCCTGCACGTCCAGCCGGAACAACTGGCCGCGGTGCGCGAGCAGGTCGCCCGGGTGCTCA
AGGATTTCCCCGAGGTGGGCTACCTGGAAGTGGTCGGCGATGCCCGGTTGGACCAGGGCGGTTGCATCCTGGAAACCGAG
ATCGGGATCATCGACGCTTCGCTCGACAGCCAGTTGGCGGCGTTGCAGGCCGCATTGACGGAGAGCGTGGCGCGGAGCGG
CGAGGAGGAAGGGGACGCCGGTTGA

Protein sequence :
MRARDYQDYLSANRLVEAARERAAEIEREAHEVYQEQKRLGWEAGLEEARLRQAGLIQETLLRCNRYYRQVDRQLGEVVL
QAVRKVLRHYDAVELTLAATREALALVSNQKQVILHVQPEQLAAVREQVARVLKDFPEVGYLEVVGDARLDQGGCILETE
IGIIDASLDSQLAALQAALTESVARSGEEEGDAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18079.1 LscL Not tested TTSS locus Protein 2e-39 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PADK2_17070 YP_006483395.1 type III secretion system protein VFG0220 Protein 2e-61 99
PADK2_17070 YP_006483395.1 type III secretion system protein VFG0411 Protein 4e-40 61