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Name : PADK2_16630 (PADK2_16630) Accession : YP_006483307.1 Strain : Pseudomonas aeruginosa DK2 Genome accession: NC_018080 Putative virulence/resistance : Unknown Product : microcin C ABC transporter ATP-binding protein YejF Function : - COG functional category : - COG ID : - EC number : - Position : 3606734 - 3608344 bp Length : 1611 bp Strand : + Note : COG4172 ABC-type uncharacterized transport system, duplicated ATPase component DNA sequence : ATGAGCGAGAACATTCTGGAAATCCGCGACCTCGCCGTCGAATTCCTCTCCGGCGAGCAACGCCAGCGGGTGGTCGAAGG CGTCAGCTTCGACATCCGCCAGGGCGAGACCCTGGCCCTGGTCGGCGAAAGCGGCTCGGGCAAGTCGGTGACCGCCCACT CGATCCTGCGCCTGCTGCCCTACTCCGTCGCCAGCCACCCAGCAGGCAGCATCCACTACCAGGGCGAGGATCTGCTCAAG CTCCCGGAACGGCGCCTGCGCGGGATCCGCGGCAACCGCATCGCCATGGTCTTCCAGGAACCCATGACCTCGCTCAATCC GCTGCATACCATCGAGAAGCAGCTCGCCGAGGTCCTCGCCCTGCACAAGGGCCTGGGTGGCGCCAAGGCCAGCGCGAGAA TTCTCGAACTGCTCGAGCTGGTCGGCATCCCCGAGCCGGCCAAGCGCCTGAAAGCCTATCCACACGAACTCTCCGGCGGC CAGCGGCAGCGGGTGATGATCGCCATGGCCCTGGCCTGCGAGCCGCAACTGCTGATCGCCGACGAACCGACCACCGCGCT CGACGTCACCGTCCAGTTGAAGATCCTCGATCTGCTCAAGGACCTGCAGGCACGCCTGGGCATGTCCCTGCTGCTGATCA CCCACGACCTCAACCTGGTCCGGCGCATCGCCCACCGCGTCTGCGTCATGCAACAAGGGCGGATCGTCGAGCAGGCTTCC TGCCAGGAACTCTTCGCAGCCCCGCGACACCCCTATACCCGCGAGCTGCTCAACGCCGAGCCCAACGGTGCGCCGGCGAG CAACCCGCCCGGTGAAACCCTGTTGGCGGTGGACGACCTGCGGGTCTGGTTCCCGATCCGCAAAGGCGTGTTCCGCCGCA CCGTGGACCACGTCAAGGCGGTCGACGGGGTCAATTTCGAACTACCCCGCGGGCAGACGCTGGGCATCGTTGGCGAAAGC GGCTCGGGCAAGTCGACCCTTGGCCTGGCGATCCTGCGGCTGCTGGAAAGCCAGGGCGGCATCCGCTTCGAAGGCACCCG GCTGGACGGTCTCGCGCAACATGACGTGCGCCCGCTGCGCCGCGAGATGCAGGTGGTGTTCCAGGACCCGTATGGCAGCC TCAGCCCACGCATGTGTGTCGGCGAGATCGTCGGCGAAGGCCTGCGCATCCATAGGATCGGCAGCGAGGCCGAACAGGAG CAGGCGATCATCGACGCGCTGGTGGAGGTCGGGCTCGATCCGCAGACCCGCTACCGTTACCCCCACGAATTCTCCGGCGG CCAGCGCCAGCGCATCGCCATCGCCCGGGCACTGGTGCTGAAACCGGCACTGATCCTGCTCGACGAACCGACCTCGGCGC TCGACCGCACCGTGCAGCGCCAGGTCGTGGAATTGCTGCGGCAACTGCAGGGCAAGTACAACCTCACCTACCTGTTCATC AGCCACGACCTGGCGGTGGTCAAGGCGCTCAGCCACCAGCTGATGGTGGTTCGACATGGCAAGGTAGTGGAACAGGGCAG CGCCGAAGCGGTTTTCGCCTCGCCGCAACATCCCTATACGCAGCAATTGCTGGAGGCTGCCTTCATGGCCCCGGCAAGCG CGGAAAACTGA Protein sequence : MSENILEIRDLAVEFLSGEQRQRVVEGVSFDIRQGETLALVGESGSGKSVTAHSILRLLPYSVASHPAGSIHYQGEDLLK LPERRLRGIRGNRIAMVFQEPMTSLNPLHTIEKQLAEVLALHKGLGGAKASARILELLELVGIPEPAKRLKAYPHELSGG QRQRVMIAMALACEPQLLIADEPTTALDVTVQLKILDLLKDLQARLGMSLLLITHDLNLVRRIAHRVCVMQQGRIVEQAS CQELFAAPRHPYTRELLNAEPNGAPASNPPGETLLAVDDLRVWFPIRKGVFRRTVDHVKAVDGVNFELPRGQTLGIVGES GSGKSTLGLAILRLLESQGGIRFEGTRLDGLAQHDVRPLRREMQVVFQDPYGSLSPRMCVGEIVGEGLRIHRIGSEAEQE QAIIDALVEVGLDPQTRYRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRQLQGKYNLTYLFI SHDLAVVKALSHQLMVVRHGKVVEQGSAEAVFASPQHPYTQQLLEAAFMAPASAEN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 5e-76 | 43 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 5e-76 | 43 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 5e-76 | 43 |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 5e-76 | 43 |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 5e-93 | 43 |
