|
Name : PADK2_16575 (PADK2_16575) Accession : YP_006483296.1 Strain : Pseudomonas aeruginosa DK2 Genome accession: NC_018080 Putative virulence/resistance : Virulence Product : Orn/Arg/Lys decarboxylase Function : - COG functional category : - COG ID : - EC number : - Position : 3593314 - 3595569 bp Length : 2256 bp Strand : - Note : COG1982 Arginine/lysine/ornithine decarboxylases DNA sequence : ATGTATAAAGACCTCAAATTTCCCGTCCTCATCGTCCATCGCGACATCAAGGCCGACACCGTTGCCGGCGAACGCGTGCG GGGCATCGCCCACGAACTGGAGCAGGACGGCTTCAGCATTCTCTCCACCGCCAGCTCCGCCGAGGGGCGCATCGTCGCTT CCACCCACCACGGCCTGGCCTGCATTCTGGTCGCCGCCGAAGGTGCCGGGGAAAACCAGCGCCTGCTGCAGGATGTGGTC GAACTGATCCGCGTGGCCCGCGTGCGGGCGCCGCAATTGCCGATCTTCGCCCTCGGCGAGCAGGTGACCATCGAGAACGC GCCGGCCGAGTCCATGGCCGACCTGCACCAGTTGCGCGGCATCCTCTACCTGTTCGAAGACACCGTGCCGTTCCTCGCCC GCCAGGTCGCCCGGGCGGCGCGCAACTACCTGGCCGGGCTGCTGCCGCCATTCTTCCGTGCGCTGGTCGAGCACACCGCG CAGTCCAACTATTCCTGGCATACGCCGGGCCACGGCGGCGGTGTCGCCTATCGCAAGAGTCCGGTGGGACAGGCCTTCCA CCAGTTCTTCGGGGAGAACACGCTGCGTTCCGACCTGTCGGTCTCGGTCCCCGAGCTGGGATCGCTGCTCGACCATACCG GCCCCCTGGCCGAGGCCGAGGACCGTGCCGCGCGCAATTTCGGCGCCGACCATACCTTCTTCGTGATCAATGGCACTTCC ACCGCGAACAAGATCGTCTGGCACTCCATGGTCGGTCGCGAAGACCTGGTGCTGGTGGACCGCAACTGCCACAAGTCGAT CCTCCACTCGATCATCATGACCGGGGCGATACCGCTCTACCTGACTCCGGAACGCAACGAACTGGGGATCATCGGGCCGA TCCCGCTGAGCGAATTCAGCAAGGAGTCGATCGCCGCGAAGATCGCCGCCAGCCCGCTGGCGCGCGGCCGCGAGCCGAAG GTGAAGCTGGCGGTGGTGACCAACTCCACCTACGACGGCCTGTGCTACAACGCCGAGCTGATCAAGCAGACCCTCGGCGA CAGCGTCGAGGTGTTGCACTTCGACGAGGCTTGGTACGCCTATGCCGCGTTCCACGAGTTCTACGACGGACGCTATGGGA TGGGCACCTCGCGCAGCGAGGAGGGTCCCCTGGTGTTCGCCACCCACTCCACGCACAAGATGCTCGCCGCCTTCAGCCAG GCCTCGATGATCCACGTGCAGGATGGCGGGACCCGGAAGCTGGACGTGGCGCGCTTCAACGAAGCCTTCATGATGCACAT CTCGACCTCGCCGCAGTACGGCATCATCGCTTCGCTGGACGTGGCTTCGGCGATGATGGAGGGGCCCGCCGGGCGTTCGC TGATCCAGGAGACCTTCGACGAGGCCCTCAGCTTCCGCCGGGCCTTGGCCAACGTACGGCAGAACCTGGACCGGAACGAC TGGTGGTTCGGCGTCTGGCAGCCGGAGCAGGTGGAGGGCACCGATCAGGTCGGCACCCATGACTGGGTGCTGGAGCCGAG CGCCGACTGGCACGGCTTCGGCGATATCGCCGAAGACTACGTGCTGCTCGATCCGATCAAGGTCACCCTGACCACCCCGG GCTTGAGCGCCGGCGGCAAGCTCAGCGAGCAGGGGATTCCGGCTGCCATCGTCAGCCGCTTCCTCTGGGAGCGCGGGCTG GTGGTGGAGAAAACCGGTCTCTACTCCTTCCTGGTGCTGTTCTCGATGGGCATCACCAAGGGCAAGTGGAGCACCCTGGT CACCGAACTGCTCGAATTCAAGCGCTGTTACGACGCCAACCTGCCGCTGCTCGACGTCTTGCCCTCCGTGGCCCAGGCCG GCGGCAAGCGCTACAACGGCGTGGGCCTGCGCGACCTCAGCGACGCCATGCACGCCAGCTACCGCGACAACGCCACGGCG AAGGCCATGAAGCGCATGTACACGGTGCTGCCGGAGGTCGCGATGCGGCCGTCCGAGGCCTACGACAAGCTGGTGCGCGG CGAGGTCGAGGCGGTACCGATCGCTCGGTTGGAAGGGCGCATCGCGGCCGTCATGCTGGTACCCTATCCGCCGGGTATCC CGCTGATCATGCCGGGTGAGCGCTTCACCGAGGCGACCCGCTCGATCCTCGACTATCTCGAGTTCGCGCGGACCTTCGAG CGCGCCTTCCCTGGTTTCGACTCCGATGTGCACGGCCTGCAGCATCAGGACGGACCGTCCGGGCGCTGCTATACCGTTGA ATGCATAAAAGAATGA Protein sequence : MYKDLKFPVLIVHRDIKADTVAGERVRGIAHELEQDGFSILSTASSAEGRIVASTHHGLACILVAAEGAGENQRLLQDVV ELIRVARVRAPQLPIFALGEQVTIENAPAESMADLHQLRGILYLFEDTVPFLARQVARAARNYLAGLLPPFFRALVEHTA QSNYSWHTPGHGGGVAYRKSPVGQAFHQFFGENTLRSDLSVSVPELGSLLDHTGPLAEAEDRAARNFGADHTFFVINGTS TANKIVWHSMVGREDLVLVDRNCHKSILHSIIMTGAIPLYLTPERNELGIIGPIPLSEFSKESIAAKIAASPLARGREPK VKLAVVTNSTYDGLCYNAELIKQTLGDSVEVLHFDEAWYAYAAFHEFYDGRYGMGTSRSEEGPLVFATHSTHKMLAAFSQ ASMIHVQDGGTRKLDVARFNEAFMMHISTSPQYGIIASLDVASAMMEGPAGRSLIQETFDEALSFRRALANVRQNLDRND WWFGVWQPEQVEGTDQVGTHDWVLEPSADWHGFGDIAEDYVLLDPIKVTLTTPGLSAGGKLSEQGIPAAIVSRFLWERGL VVEKTGLYSFLVLFSMGITKGKWSTLVTELLEFKRCYDANLPLLDVLPSVAQAGGKRYNGVGLRDLSDAMHASYRDNATA KAMKRMYTVLPEVAMRPSEAYDKLVRGEVEAVPIARLEGRIAAVMLVPYPPGIPLIMPGERFTEATRSILDYLEFARTFE RAFPGFDSDVHGLQHQDGPSGRCYTVECIKE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66195.1 | putative cadaverin decarboxylase | Virulence | PAI III 536 | Protein | 2e-130 | 45 |
| cadA | NP_756988.1 | lysine decarboxylase, inducible | Not tested | PAI II CFT073 | Protein | 2e-127 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PADK2_16575 | YP_006483296.1 | Orn/Arg/Lys decarboxylase | VFG1670 | Protein | 1e-130 | 45 |
