Gene Information

Name : PADK2_15730 (PADK2_15730)
Accession : YP_006483127.1
Strain : Pseudomonas aeruginosa DK2
Genome accession: NC_018080
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3407675 - 3409195 bp
Length : 1521 bp
Strand : -
Note : COG1012 NAD-dependent aldehyde dehydrogenases

DNA sequence :
ATGATCTACGCAGCGCCCGGAACCCCCGGTGCCGTCGTCACCTTCAAGCCTCGCTACGGCAACTACATCGGCGGCGAGTT
CGTGCCTCCGGTCAAGGGCCAGTACTTCACCAACACCTCGCCGGTGAACGGCCAGCCGATCGCCGAGTTCCCCCGTTCCA
CCGCCGAGGACATCGACAAGGCCCTCGACGCCGCCCACGCCGCCGCCGACGCCTGGGGCCGCACCTCGGTGCAGGAGCGC
TCGAACATCCTGCTGAAGATCGCCGACCGCATCGAGCAGAACCTGGAACTGCTCGCCGTCACCGAGACCTGGGACAACGG
CAAGGCCGTGCGCGAGACCCTCAACGCCGACATCCCCCTGGCCGCCGACCACTTCCGCTACTTCGCCGGCTGCATCCGCG
CCCAGGAAGGCTCCGCCGCCGAGATCAACGACAGCACCGTGGCCTACCACATCCATGAGCCGCTGGGCGTGGTCGGGCAG
ATCATCCCGTGGAACTTCCCGCTGCTGATGGCCGCCTGGAAGCTGGCCCCGGCGCTGGCCGCCGGCAACTGCGTGGTGCT
CAAGCCGGCCGAGCAGACCCCGCTGGGCATCTGCGTGCTGCTGGAACTCATCGGCGACCTGCTGCCGCCGGGCGTGCTCA
ACGTCGTCCAGGGCTTCGGCAGGGAGGCCGGCGAGGCCCTGGCCACCAGCAAGCGCATCGCCAAGATCGCCTTCACCGGT
TCCACCCCGGTCGGCTCGCACATCCTCAAGTGCGCGGCGGAGAACATCATTCCCTCCACCGTCGAGCTGGGCGGCAAGAG
CCCGAACATCTATTTCGAAGACATCATGCAGGCCGAGCCGGCGTTCATCGAGAAGGCCGCCGAGGGCCTGGTGCTGGCCT
TCTTCAACCAGGGCGAGGTGTGCACCTGCCCGTCCCGCGCGCTGGTCCAGGAGTCGATCTACCCGGCATTCATGGAAGAG
GTGCTGAAAAAGGTCAGGGCGATCAAGCGCGGCGACCCGCTGGACACCGAGACCATGGTCGGCGCCCAGGCTTCCCAGCA
GCAGTACGAGAAGATCCTCTCCTACCTCGACATCGCCCAGCAGGAAGGCGCCGAGCTGCTCGCCGGCGGCAGCGTCGAGA
AGCTCGAAGGCAACCTGGCCAGCGGCTACTACATCCAGCCGACCCTGCTCAAGGGGCACAACGGCATGCGCGTGTTCCAG
GAGGAAATCTTCGGCCCGGTGGTCGGCGTCACCACCTTCAAGGACGAAGCCGAGGCCCTGGCCATCGCCAACGACACCGA
GTACGGCCTCGGCGCCGGCCTCTGGACCCGTGACATCAACCGCGCCTACCGCATGGGCCGCGGGATCAAGGCCGGTCGCG
TGTGGACCAACTGCTACCACCTGTACCCGGCCCACGCCGCGTTCGGCGGCTACAAGAAGTCCGGCGTCGGTCGCGAGACG
CACAAGATGATGCTCGACCACTACCAGCAGACCAAGAACCTGCTGGTGAGCTACGACATCAACCCGCTGGGCTTCTTCTG
A

Protein sequence :
MIYAAPGTPGAVVTFKPRYGNYIGGEFVPPVKGQYFTNTSPVNGQPIAEFPRSTAEDIDKALDAAHAAADAWGRTSVQER
SNILLKIADRIEQNLELLAVTETWDNGKAVRETLNADIPLAADHFRYFAGCIRAQEGSAAEINDSTVAYHIHEPLGVVGQ
IIPWNFPLLMAAWKLAPALAAGNCVVLKPAEQTPLGICVLLELIGDLLPPGVLNVVQGFGREAGEALATSKRIAKIAFTG
STPVGSHILKCAAENIIPSTVELGGKSPNIYFEDIMQAEPAFIEKAAEGLVLAFFNQGEVCTCPSRALVQESIYPAFMEE
VLKKVRAIKRGDPLDTETMVGAQASQQQYEKILSYLDIAQQEGAELLAGGSVEKLEGNLASGYYIQPTLLKGHNGMRVFQ
EEIFGPVVGVTTFKDEAEALAIANDTEYGLGAGLWTRDINRAYRMGRGIKAGRVWTNCYHLYPAHAAFGGYKKSGVGRET
HKMMLDHYQQTKNLLVSYDINPLGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-149 67
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 5e-157 66
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 5e-157 66
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 5e-157 66
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-156 66

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PADK2_15730 YP_006483127.1 aldehyde dehydrogenase VFG0082 Protein 1e-149 67