Gene Information

Name : PADK2_14325 (PADK2_14325)
Accession : YP_006482848.1
Strain : Pseudomonas aeruginosa DK2
Genome accession: NC_018080
Putative virulence/resistance : Unknown
Product : Tn4656/Tn4657/Tn4658 transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3092391 - 3095357 bp
Length : 2967 bp
Strand : +
Note : COG4644 Transposase and inactivated derivatives, TnpA family

DNA sequence :
ATGCCGCGTCGCTCGATTCTCTCGGCTACGGAGCGCGACACCCTGCTTGCGCTGCCAGAAAGCCAGGATGACCTGATCCG
CTACTACACCTTCAACGACTCCGACCTATCCCTGATCCGTCAACGGCGGGGCGATGGCAACCGCCTCGGCTTCGCCGTGC
AGCTCTGCCTGCTGCGCTACCCTGGTTATGCGCTGGGCAACGACACGGCGCTACCCGAGCCCGTGATCCAGTGGGTGGCC
AAGCAAGTCCAAGCCGACCCCGCGAGTTGGGCGAAGTACGGTGAGCGCGACGTGACCCGCCGCGAGCACGCTCTGGAACT
GCGCACCTACCTGCAACTGGCCCCGTTCGGTCTGTCGGACTTCCGCGCCCTGGTGCGCGAGTTGACCGAGCTGGCCCAGC
AGACCGACAAGGGCTTGCTGCTGGCCGGGCAGGCGCTGGAGAGCTTGCGCCAGAAGCGGCGCATCCTGCCGACGCTGAGC
GTTATTGACCGGGCGTGTTCGGAGGCCATTGCACGCGCCAATCGGCGGGTCTATCGCGCCCTGATCGAGCCGTTGAACCC
ATCGCATCACGCCAAGCTCGACGAACTGCTCACCATTAAGGCCGGCAGCAACAGCACTTGGTTGACCTGGTTGCGGCAAT
CACCGCTGAAGCCGAACTCGCGGCACATGATCGAGCACATCGAGCGGCTGAAGATTTTCCAACTGGTGGGCCTTCCCGAC
AGCCTCGGCCGGCACATCCACCAGAACCGATTGCTGAAGCTCGCCCGCGAGGGCGGGCAGATGACGCCACAAGACCTCGG
CAAGTTCGAACCGGAGAGGCGCTATGCCACGCTGGTCGCCGTGGTACTGGAAAGCACCGCGACCGTGATCGATGAACTGG
TTGATCTGCACGACCGCATCCTGGTCAAGCTGTTCAGTGGCGCGAAACACAAGCATCAGCAGCAGTTCCAGAAGCAGGGC
AAAGCGATCAATGACAAGGTGCGCCTGTACTCGAAGATCGGCCAGGCCCTGCTGGACGCTAAAGAGTCCGGTGACGATCC
GTTCGCCGCCATCGAGGCGGTCATTCCCTGGGACGAGTTCACCCAGAGTGTCACTGAGGCCGAGCTGCTGGCCCGGCCGG
AAGCCTTCGACCACCTGCACCTGGTCAGCGAGAACTTCGCTACGCTACGCCGCTACACCCCAGCCTTTCTGGAGGTGCTT
CAGCTCCGAGCCGCGACGGCAGCGCAAGCCGTGCTGGATGCCGTTCAGACCCTACGCGAGATGAATGCCGATAATCTGCG
CAAGGTGCCCTCCGACGCACCGACCGCCTTCATCAAGCCGCGCTGGAAACCGCTGGTGATCACCCCGGAAGGCATCGACC
GGCGCTTCTACGAAATCTGCGCCTTGTCCGAGTTGAAGAACGCGCTGCGCTCCGGCGACATCTGGGTCAAAGGCTCGCGG
CAGTTCCGCGACTTCGATGACTACCTACTGCCTCCCGAGAAATTCGCCGCACTCAAGCGGGAACAGGCGCTGCCACTCGC
GATCAACCCGAACAGCGACCAGTACCTGGAAGAGCGTTTGCAGCTGCTGGACGAGCAGCTGGCCACTGTCACCCGACTGG
CAAAGGACAACGAACTACCCGATGCCATCCTCACCGAGTCCGGGCTAAAAATCACCCCGCTGGATTCCGCGGTGCCCAAC
ACCGCGCAGGCGCTGATCGACCAGACCAGCCAGCTACTGCCGCGCATCAAGATCACCGAGCTGCTGATGGATGTGGATGA
ATGGACGGGCTTCACCCGCCACTTCACGCACCTGAAGGATGGCGCACAGGCGAAAGACCGGACGCTACTGCTAACGGCGA
TCCTGGGCGATGCCATCAACCTCGGCCTGACCAAAATGGCCGAGTCGAGTCCGGGCATGACCTACGCCAAGCTGTCCTGG
TTGCAAGCCTGGCACATCCGTGACGAAACCTACTCGACGGCCCTGGCCGAGCTGGTCAACAGCCAGTTCCGGCATGCCTT
CGCCGCCAACTGGGGTGACGGCACCACCTCATCCTCCGATGGCCAGCGTTTCCGTGCCGGCGGTAAAGGCGAGAGCACCG
GCCACGTCAACCCGAAGTACGGTAGCGAGCCAGGACGGCTGTTCTACACCCACATCTCTGACCAGTACGCGCCGTTCAGC
ACCCGCGTGGTGAATGTAGGCGTGCGTGATTCCACCTACGTGCTCGACGGTCTGCTGTACCACGAGTCCGATCTGCGGAT
CGAGGAGCACTACACCGACACCGCTGGCTTCACCGATCACGTCTTCGCCCTGATGCACCTGCTGGGCTTCCGCTTCGCGC
CGCGCATCCGCGACCTCGGTGAAACCAAGTTGTATGTGCCCAATAGCGTCCAAGACTACCCGACGCTGCGTCCAATGCTC
GGCGGAACCCTGAACATCAAGCACGTCTGCGCTCACTGGGACGAGATTCTGCGGCTGGCCGCGTCGATCAAGCAGGGCAC
CGTCACCGCATCGCTGATGCTGCGCAAGCTTGGCAGCTACCCGCGCCAGAACGGCCTGGCCGTGGCTCTGCGCGAGCTGG
GTCGGATCGAGCGCACGCTGTTCATCCTCGATTGGCTGCAAAGCGTGGAACTGCGTCGCCGCGTGCATGCCGGATTGAAC
AAGGGCGAGGCGCGTAACTCCCTGGCCAGGGCGGTGTTCTTCAACCGCCTCGGCGAGATCAGGGATCGGAGTTTCGAGCA
GCAGCGCTACCGGGCCAGCGGCCTCAACCTGGTGACGGCCGCCATCGTGTTGTGGAACACCGTGTACTTGGAGCGCGCGA
CCCAGGCCCGAGAAGAGGCAGGCAAGCCAGTTAATCCTGAGTTACTGCAATACCTTTCGCCATTGGGCTGGGAGCACATC
AACCTGACCGGCGATTACGTTTGGCGGCAAAGCCGCAAGCTGGAAGACGGGAAATTCAGGCCGCTGCGGCAGCTCGGAAA
ACCTTAG

Protein sequence :
MPRRSILSATERDTLLALPESQDDLIRYYTFNDSDLSLIRQRRGDGNRLGFAVQLCLLRYPGYALGNDTALPEPVIQWVA
KQVQADPASWAKYGERDVTRREHALELRTYLQLAPFGLSDFRALVRELTELAQQTDKGLLLAGQALESLRQKRRILPTLS
VIDRACSEAIARANRRVYRALIEPLNPSHHAKLDELLTIKAGSNSTWLTWLRQSPLKPNSRHMIEHIERLKIFQLVGLPD
SLGRHIHQNRLLKLAREGGQMTPQDLGKFEPERRYATLVAVVLESTATVIDELVDLHDRILVKLFSGAKHKHQQQFQKQG
KAINDKVRLYSKIGQALLDAKESGDDPFAAIEAVIPWDEFTQSVTEAELLARPEAFDHLHLVSENFATLRRYTPAFLEVL
QLRAATAAQAVLDAVQTLREMNADNLRKVPSDAPTAFIKPRWKPLVITPEGIDRRFYEICALSELKNALRSGDIWVKGSR
QFRDFDDYLLPPEKFAALKREQALPLAINPNSDQYLEERLQLLDEQLATVTRLAKDNELPDAILTESGLKITPLDSAVPN
TAQALIDQTSQLLPRIKITELLMDVDEWTGFTRHFTHLKDGAQAKDRTLLLTAILGDAINLGLTKMAESSPGMTYAKLSW
LQAWHIRDETYSTALAELVNSQFRHAFAANWGDGTTSSSDGQRFRAGGKGESTGHVNPKYGSEPGRLFYTHISDQYAPFS
TRVVNVGVRDSTYVLDGLLYHESDLRIEEHYTDTAGFTDHVFALMHLLGFRFAPRIRDLGETKLYVPNSVQDYPTLRPML
GGTLNIKHVCAHWDEILRLAASIKQGTVTASLMLRKLGSYPRQNGLAVALRELGRIERTLFILDWLQSVELRRRVHAGLN
KGEARNSLARAVFFNRLGEIRDRSFEQQRYRASGLNLVTAAIVLWNTVYLERATQAREEAGKPVNPELLQYLSPLGWEHI
NLTGDYVWRQSRKLEDGKFRPLRQLGKP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpA ACY75538.1 TnpA Not tested Tn6060 Protein 0.0 93
EXA24 ABD94633.1 truncated Tn1721 tranposase Not tested ExoU island A Protein 0.0 91
EC042_4089 YP_006098372.1 transposase Not tested Tn2411 Protein 0.0 74
tnpA ACF06153.1 transposase Not tested Tn5036-like Protein 0.0 73
tnpA AAL08440.1 transposase TnpA Not tested SRL Protein 0.0 72

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PADK2_14325 YP_006482848.1 Tn4656/Tn4657/Tn4658 transposase VFG1031 Protein 0.0 72