Gene Information

Name : PADK2_13885 (PADK2_13885)
Accession : YP_006482760.1
Strain : Pseudomonas aeruginosa DK2
Genome accession: NC_018080
Putative virulence/resistance : Resistance
Product : arsenical pump membrane protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3001695 - 3002978 bp
Length : 1284 bp
Strand : -
Note : COG1055 Na+/H+ antiporter NhaD and related arsenite permeases

DNA sequence :
ATGCTGATCGCCTTCGCCATCTTCCTGTTCACCCTGGTCCTGGTCATCTGGCAGCCCAGGGGCCTCGGCATCGGCTGGAG
CGCCAGCATCGGCGCCCTGCTCGCCCTGGCGCTGGGCAGCGTCGCGCCGGGCGACATCCCGACCGTCTGGAACATCGTCT
GGAATGCCACCGCCACCTTCATCGCGGTGATCGTCATCAGCCTGCTGCTGGACGAGGCCGGCTTCTTCGAATGGGCCGCG
CTGCACGTCGCGCGCTGGGCTGGCGGCGACGGCCGGCGCCTGTTCGCCTTCTGCGTGCTGCTCGGCGCGGCGGTCTCGGC
GCTGTTCGCCAACGACGGCGCGGCGCTGATCCTCACGCCCATCGTGATGTCGATGCTGCTGGCCCTGCGCTTCAGCCCGG
CGGCGACCCTGGCCTTCGTCATGGCGGCGGGCTTCATCGCCGACAGCGCCAGCCTGCCGCTGGTGGTCTCGAACCTGGTG
AACATCGTCTCGGCCGACTACTTCGGGCTCGGCTTCGGCGAGTACGCCGCGGTCATGCTGCCGGTAAACCTGGTGAGCGT
CGCGACCTCCCTGCTGGTGCTGTTCCTCTATTTCCGCCGCGACCTGCCGCCGGTCTATGCGCTGGAGCAATTGAAGCCGC
CGCGGGCGGCGATCCGCGACCGCGCGACCTTCGTCGTCGGTGGCTGGATGCTGCTGGTCCTGCTCGCCGGGCTGTTCGCC
CTGGAGCCGCTGGGCGTCCCCGTCAGCGCGGTGGCCGCGGCCTGTGCGGCGCTGCTGCTGGCGGTGGCCGGGCGCGGGCG
GGTGATCTCGACCCGGCGGGTGCTGCGCGAAGCGCCCTGGCAGATCGTGGTCTTCTCGCTGGGCATGTACCTGGTGGTCT
ACGGCCTGAAGAACGCCGGTCTCACCGACCTCCTGGCGCAGCTCCTGAACCGCCTGGCCGAGCACGGCGTATGGGCGGCC
GCGCTGGGTACCGGACTGCTTTCCGCCGCCCTCTCGTCGGTAATGAACAACATGCCCAGCGTGCTGCTCGGCGCCCTGTC
GATCCAGGCCAGCGACACCGCCGGCGCGGTGCGCGAAGCGATGATCTACGCCAACGTCATCGGCTGCGACCTGGGTCCGA
AGATCACCCCTATCGGCAGCCTGGCGACGCTGCTCTGGCTGCACGTGCTGGCGCGCAAAGGCATGCGCATCACCTGGGGC
TACTACTTCAGGGTCGGCGCCCTGCTGACCCTGCCGGTCCTGCTGGCGACCCTTTCGGCCCTGGCCCTGCGCCTGGCCAT
CTGA

Protein sequence :
MLIAFAIFLFTLVLVIWQPRGLGIGWSASIGALLALALGSVAPGDIPTVWNIVWNATATFIAVIVISLLLDEAGFFEWAA
LHVARWAGGDGRRLFAFCVLLGAAVSALFANDGAALILTPIVMSMLLALRFSPAATLAFVMAAGFIADSASLPLVVSNLV
NIVSADYFGLGFGEYAAVMLPVNLVSVATSLLVLFLYFRRDLPPVYALEQLKPPRAAIRDRATFVVGGWMLLVLLAGLFA
LEPLGVPVSAVAAACAALLLAVAGRGRVISTRRVLREAPWQIVVFSLGMYLVVYGLKNAGLTDLLAQLLNRLAEHGVWAA
ALGTGLLSAALSSVMNNMPSVLLGALSIQASDTAGAVREAMIYANVIGCDLGPKITPIGSLATLLWLHVLARKGMRITWG
YYFRVGALLTLPVLLATLSALALRLAI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB2 YP_001007633.1 arsenical pump membrane protein Not tested YAPI Protein 9e-111 71
arsB YP_005754065.1 arsenical pump membrane protein Not tested Type-XI SCCmec Protein 3e-85 53
arsB YP_252017.1 arsenical pump membrane protein Not tested SCCmec Protein 3e-87 53
SH0109 YP_252024.1 arsenical pump membrane protein Not tested SCCmec Protein 6e-88 53

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PADK2_13885 YP_006482760.1 arsenical pump membrane protein BAC0578 Protein 4e-112 72
PADK2_13885 YP_006482760.1 arsenical pump membrane protein BAC0577 Protein 4e-107 71
PADK2_13885 YP_006482760.1 arsenical pump membrane protein BAC0576 Protein 7e-112 71
PADK2_13885 YP_006482760.1 arsenical pump membrane protein BAC0031 Protein 8e-113 71
PADK2_13885 YP_006482760.1 arsenical pump membrane protein BAC0575 Protein 8e-88 53
PADK2_13885 YP_006482760.1 arsenical pump membrane protein BAC0574 Protein 7e-88 53