Gene Information

Name : PADK2_12145 (PADK2_12145)
Accession : YP_006482414.1
Strain : Pseudomonas aeruginosa DK2
Genome accession: NC_018080
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2567358 - 2568185 bp
Length : 828 bp
Strand : -
Note : -

DNA sequence :
ATGTCTCTGGTATCCCGCTTTGCTCCGCAATCCCCGATCCTGCGCTCTGATCGCCCACTCTCGGACGACCGCATTCGTGC
CGTCGTTCCGTCGATCTTCGCCGACGCTCCACATGGGAGCCGGTCCGATCGGTATGCCTACATACCGACCTCGACCGTGC
TGACCAAGCTGCGCCAGGAGGGCTTCGAGCCCTTCATGGTGTGTCAGACGCGCGTGCGCAACGAAGACCGGCGCGAGTAC
ACGAAGCACCTCATCCGACTTCGCCATGCAAGCCAGATCAACGGCGACGAGGCGAACGAGATCATCCTGCTCAACAGCCA
TGACGGCACGAGCAGCTATCAGATGCTCGCCGGCATGTTCCGGTTCGTCTGCCACAACGGCCTGGTTTGCGGTGACACCA
CCGCAGACATCCGCGTTCCCCACAAGGGCGACGTGGCCAGCCAGGTGATCGAAGGTGCCTACGGAGTCCTCGAAGGTTTC
GAGCGCGTGCATAACGCGCGCGATGCGATGCGCACCATCACCCTCGATGAGGGCGAAGCGGAGGTCTTTGCGAACTCTGC
GCTCGCACTCAAGTACGACGATCCGGCCAAGTCCACGCCTGTCACCGAGAGCCAACTGCTGGCCCCTCGGCGATGGGACG
ACCGCAAGAACGACCTGTGGGCCGTCTTCAACCGCGTCCAGGAGAACCTAGTCAAAGGGGGCCTGAACGGACGCACGGCC
AACGGCCGCAATCAGCGCACCCGTCCGGTGCAAGGCATCGACCAGAACCTGCGCCTGAACCGGGCGTTGTGGCTGCTGGC
CGAAGGCATGCGCCAGCTCAAGGCGTGA

Protein sequence :
MSLVSRFAPQSPILRSDRPLSDDRIRAVVPSIFADAPHGSRSDRYAYIPTSTVLTKLRQEGFEPFMVCQTRVRNEDRREY
TKHLIRLRHASQINGDEANEIILLNSHDGTSSYQMLAGMFRFVCHNGLVCGDTTADIRVPHKGDVASQVIEGAYGVLEGF
ERVHNARDAMRTITLDEGEAEVFANSALALKYDDPAKSTPVTESQLLAPRRWDDRKNDLWAVFNRVQENLVKGGLNGRTA
NGRNQRTRPVQGIDQNLRLNRALWLLAEGMRQLKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C80 AAN62174.1 conserved hypothetical protein; associated with oriT region on plasmids Not tested PAGI-2(C) Protein 2e-120 100
ORF SG86 AAN62307.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 7e-101 78
ECO103_3587 YP_003223444.1 hypothetical protein Not tested LEE Protein 4e-67 53
unnamed CAI43843.1 hypothetical protein Not tested LEE Protein 2e-66 52
S3199 NP_838482.1 hypothetical protein Not tested SHI-1 Protein 9e-67 52
aec71 AAW51754.1 Aec71 Not tested AGI-3 Protein 2e-66 52
SF2994 NP_708768.1 hypothetical protein Not tested SHI-1 Protein 9e-67 52
yafZ ADD91704.1 YafZ Not tested PAI-I AL862 Protein 2e-66 52
z1215 CAD33785.1 Z1215 protein Not tested PAI I 536 Protein 3e-67 52
Z1215 NP_286750.1 hypothetical protein Not tested TAI Protein 3e-67 52
yafZ CAE85199.1 YafZ protein Not tested PAI V 536 Protein 7e-69 52
Z1655 NP_287158.1 hypothetical protein Not tested TAI Protein 3e-67 52
unnamed CAD66201.1 hypothetical protein Not tested PAI III 536 Protein 3e-65 51
ORF_47 AAZ04456.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 1e-65 51
c5156 NP_757004.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-65 51
unnamed CAD42096.1 hypothetical protein Not tested PAI II 536 Protein 7e-66 51
yafZ YP_854321.1 hypothetical protein Not tested PAI I APEC-O1 Protein 1e-65 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PADK2_12145 YP_006482414.1 hypothetical protein VFG0658 Protein 4e-67 52
PADK2_12145 YP_006482414.1 hypothetical protein VFG1526 Protein 2e-67 52
PADK2_12145 YP_006482414.1 hypothetical protein VFG1676 Protein 1e-65 51
PADK2_12145 YP_006482414.1 hypothetical protein VFG1615 Protein 4e-66 51