Gene Information

Name : PADK2_12070 (PADK2_12070)
Accession : YP_006482399.1
Strain : Pseudomonas aeruginosa DK2
Genome accession: NC_018080
Putative virulence/resistance : Unknown
Product : lytic transglycosylase, catalytic
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2555150 - 2555740 bp
Length : 591 bp
Strand : -
Note : COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

DNA sequence :
ATGGCAGCGCCAGCCGTAGCCATGCCCCTGCGCGCACTGGTGCTCACTGCCGGCCTGTATGCCGTTGCCGCCCTGGCCCA
GGAGGTTCCGCCACCGGCTTACCAGCTTGCCGCCCAGCGCGCAGGCATCCCCTCGACCGTGCTCTACGCCGTGGCCTTGC
AGGAGAGCGGCATCCGGCGCAACGGGCGCCTGGTGCCGTGGCCGTGGTCCCTCAACGTCGCCGGCCAGTCGCGCCGCTTC
GCCACGCGCGCCGACGCCTGCGCTGGCCTGCAGCAGGCGATGCGCGCCACGCCGCACACGCGCATTGATGCGGGCCTGGG
CCAGATCAACCTCGGCTACCACAAGCACCGCTTTACCGGCGCGTGCGACCTGCTGGATCCGTATCGCAACCTGGCCGTTG
CCGCCGAGATCCTGAAGGAGCAGCACACCCCCGGCGAGGACTGGCTGCTGGCGATCGGCCGCTACCACCGCCCCGCAGGC
GGCGAGCCCGCCGCCCGCTATCGGCGCAGCGTGTCGCGCCACCTTGCCCGCGTGCAGGGCACGCGACCAGCCGCCGCGGT
CCTCGCGGCGCGCCAGGAGACCTCCCCATGA

Protein sequence :
MAAPAVAMPLRALVLTAGLYAVAALAQEVPPPAYQLAAQRAGIPSTVLYAVALQESGIRRNGRLVPWPWSLNVAGQSRRF
ATRADACAGLQQAMRATPHTRIDAGLGQINLGYHKHRFTGACDLLDPYRNLAVAAEILKEQHTPGEDWLLAIGRYHRPAG
GEPAARYRRSVSRHLARVQGTRPAAAVLAARQETSP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C67 AAN62161.1 conserved hypothetical protein Not tested PAGI-2(C) Protein 3e-87 100
ORF SG70 AAN62292.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 8e-58 75
pph70 CAI36111.1 soluble lytic murein transglycosylase Not tested PPHGI-1 Protein 2e-44 57
unnamed ABR13378.1 hypothetical protein Not tested PAGI-5 Protein 2e-32 52
EXA50 ABD94659.1 conserved hypothetical protein Not tested ExoU island A Protein 1e-35 51
RL050 AAP84175.1 conserved hypothetical protein Not tested PAPI-1 Protein 6e-33 49
PMI2591 YP_002152310.1 lytic transglycosylase Not tested Not named Protein 8e-26 44
STY4559 NP_458645.1 hypothetical protein Not tested SPI-7 Protein 7e-23 43
t4257 NP_807855.1 hypothetical protein Not tested SPI-7 Protein 7e-23 43