Gene Information

Name : PADK2_11935 (PADK2_11935)
Accession : YP_006482372.1
Strain : Pseudomonas aeruginosa DK2
Genome accession: NC_018080
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2530152 - 2531672 bp
Length : 1521 bp
Strand : -
Note : similar to STY4579

DNA sequence :
ATGACGCTTTTCACGACCGACTACCTGGAGTACTACCTAACCCTCGTGTCCTGGATCGTCAACAACGGCATCTGGGCGGT
CCTCGTATCCAGCGGGGTATTCGCGCTGCCTTTCGTCGCCATCATCGTGCAGGAGTGGTTGAAGGCCCGTGCGGAAGGCG
CCGACGAGGGCAACAAAGGCGTGCTGAGCGCCGCCCGCATCGAGAACCGGGTCTTCGTCGCCATCGTGGTGGTGATGTTC
GCCGGCATTCCGTTCATCGACGTGGACCTGAACACCATCCAGTACGACAGCTCGCGCTCGGCCCAGTGCCAGGTCAGCGT
GGCGCAGCCCGGGGATACCGGCTGGTCGCAGTCCTTCAGCACCATCAACAACCAGTCGGCGAAGGTGCCGGTGTGGTGGG
CGTTCATGCACGCGCTCTCGCGCGCCGTCACGGGCGCTTCGGTGGCAGCGATCCCGTGCGGCACGGACCTGCGGCAGATG
CGCATGGAGATCGACGCTACGCGCATCGATGACCCGGTGCTGGCTCAGGAAGTAGCGGATTTCTCGCGGGATTGCTATGG
GCCTGCACGGGCCAAATTGTTCATGCAGCGCCCTCAGCTCGATGAGCAGCAGATGCACGACGTGACCTGGATCGGATCGC
GGTTCTTCACCGACACGAACGGCTACTACGACACATACCGTTCCAGCACCCCACGCGAGGACTGGCCCTATGACAGCACC
CGCGACGCAGGGCTTGCGCAGGTGGCCAGCGGTGGCGGCTACCCGACCTGCCGCCAGTGGTGGAGCGATGGAAGTAACGG
CCTGCGGGCACGCCTGCTGGGTCAGGTGGACCCGAGCCTGTTGAGTCGCCTGGCGGGCTGGGCCGGGTTCCTGAGCCGGG
CCGAGGTGGACGACTCGGTGATCCGAGCCATCGCGTCACCGCGGCAGCAGAAGTTGAACCAGGGCAGCGTCTATACGGAC
TACGGAGGCCAGATCGACAAGACCTTGCCGAACATCGTGACACGGGCCACGGGAGACGTTGGGATGGCCGTCGGCGCGAT
TGCCGCGTTTCCCGCCATGGACGTCGTGAGACAGTCTCTACCCATGGTCCTCGCCTTGCTCAAGATGGCGCTGGTCATCT
GCATCCCGCTCGTGCTGGTCGTGGGCACCTATGACCTGAAGACGGTCGTCACGGTCAGCGTCGTGCAATTCGCGCTGTTC
TTCGTGGATTTCTGGTTCCAGCTCGCTCGCTGGATCGACAGCACTATCCTCGATGCGCTCTATGGCTGGGGCTTTGGCTG
GAACCGGCCACACACGAACTTCGACCCGCTGGTGGGGCTGAACAATGCGTTCGGCGACATGCTCTTGATGTTCGTCGCGG
GCACGATGTTCCTGGTGCTGCCAGGATTCTGGCTGGCAAGCCTGACCTGGGTTGGAATTCGGGCGGGACATGCCATTCAG
GGGTTGTCGGACGGCAGCAAGAGCGCCGGCCAAGCCGGGGGCAAGGGGGCTGGGGCACTCACGGGAGGCAAGCTGAAGTA
G

Protein sequence :
MTLFTTDYLEYYLTLVSWIVNNGIWAVLVSSGVFALPFVAIIVQEWLKARAEGADEGNKGVLSAARIENRVFVAIVVVMF
AGIPFIDVDLNTIQYDSSRSAQCQVSVAQPGDTGWSQSFSTINNQSAKVPVWWAFMHALSRAVTGASVAAIPCGTDLRQM
RMEIDATRIDDPVLAQEVADFSRDCYGPARAKLFMQRPQLDEQQMHDVTWIGSRFFTDTNGYYDTYRSSTPREDWPYDST
RDAGLAQVASGGGYPTCRQWWSDGSNGLRARLLGQVDPSLLSRLAGWAGFLSRAEVDDSVIRAIASPRQQKLNQGSVYTD
YGGQIDKTLPNIVTRATGDVGMAVGAIAAFPAMDVVRQSLPMVLALLKMALVICIPLVLVVGTYDLKTVVTVSVVQFALF
FVDFWFQLARWIDSTILDALYGWGFGWNRPHTNFDPLVGLNNAFGDMLLMFVAGTMFLVLPGFWLASLTWVGIRAGHAIQ
GLSDGSKSAGQAGGKGAGALTGGKLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C40 AAN62133.1 hypothetical protein Not tested PAGI-2(C) Protein 0.0 91
ORF SG48 AAN62270.1 hypothetical protein Not tested PAGI-3(SG) Protein 0.0 79
pph92 CAI36133.1 hypothetical protein Not tested PPHGI-1 Protein 2e-154 62
RL014 AAP84141.1 conserved hypothetical protein Not tested PAPI-1 Protein 3e-145 58
EXA17 ABD94626.1 conserved hypothetical protein Not tested ExoU island A Protein 1e-145 58
unnamed ABR13354.1 hypothetical protein Not tested PAGI-5 Protein 6e-145 58
STY4579 NP_458664.1 putative membrane protein Not tested SPI-7 Protein 1e-97 44
t4276 NP_807874.1 hypothetical protein Not tested SPI-7 Protein 1e-97 44
PMI2570 YP_002152289.1 hypothetical protein Not tested Not named Protein 8e-91 43