Gene Information

Name : PADK2_10370 (PADK2_10370)
Accession : YP_006482063.1
Strain : Pseudomonas aeruginosa DK2
Genome accession: NC_018080
Putative virulence/resistance : Virulence
Product : two-component response regulator, CopR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2230702 - 2231382 bp
Length : 681 bp
Strand : -
Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence :
ATGAAACTGCTGATCGTCGAAGACGAACCGCGCATCGGCCAGTACCTGCGCCAGGGGCTCGCCGAGGCAGGCTTCGCCGT
CGACCTGAGCGACGATGGCAACGAGGGCGAGCAACTGGCCCTGGGCGGCGACTACGACCTGCTGATCCTCGACGTCATGC
TGCCCGGCCGTGACGGCTGGCAGATCCTGCGCAGCGTGCGCGACGCCGGGATGACCGTACCGGTGCTGTTCCTGACCGCC
CGCGATGCCGTAGAGGACCGCGTGCGCGGCCTCGAACAAGGCGCCGACGATTACCTGGTGAAGCCGTTCGCCTTCGTCGA
ACTGCTCGCCCGGGTGCGCACCCTGCTGCGCCGGGGCAGCCAGCAGTTGCAGGAGACCACCCTGCAACTGGCCGACCTCG
AACTCGATTTGCTGCGCCGCCGGGTGCAACGCCAGGGCAAGCGGATCGACCTCACCGCCAAGGAGTTCGCCCTGCTCGAA
CTGCTGCTGCGGCGCAGCGGCGAGGTGCTGCCCAAGTCGCTGATCGCCTCGCAGGTCTGGGACATGAACTTCGACAGCGA
TACCAACGTCATCGAGGTGGCCATCCGCCGCCTGCGCGCCAAGGTCGACGACGACTACCCGCAGCGCCTGATCCATACCG
TGCGCGGCATGGGCTACGTTCTCGAAGAGCGCGACGAATGA

Protein sequence :
MKLLIVEDEPRIGQYLRQGLAEAGFAVDLSDDGNEGEQLALGGDYDLLILDVMLPGRDGWQILRSVRDAGMTVPVLFLTA
RDAVEDRVRGLEQGADDYLVKPFAFVELLARVRTLLRRGSQQLQETTLQLADLELDLLRRRVQRQGKRIDLTAKEFALLE
LLLRRSGEVLPKSLIASQVWDMNFDSDTNVIEVAIRRLRAKVDDDYPQRLIHTVRGMGYVLEERDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 3e-52 57
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 2e-51 56

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PADK2_10370 YP_006482063.1 two-component response regulator, CopR BAC0638 Protein 5e-61 73
PADK2_10370 YP_006482063.1 two-component response regulator, CopR BAC0083 Protein 8e-67 72
PADK2_10370 YP_006482063.1 two-component response regulator, CopR BAC0111 Protein 5e-64 64
PADK2_10370 YP_006482063.1 two-component response regulator, CopR BAC0308 Protein 1e-60 62
PADK2_10370 YP_006482063.1 two-component response regulator, CopR BAC0197 Protein 3e-58 60
PADK2_10370 YP_006482063.1 two-component response regulator, CopR BAC0347 Protein 3e-56 59
PADK2_10370 YP_006482063.1 two-component response regulator, CopR BAC0125 Protein 4e-58 59
PADK2_10370 YP_006482063.1 two-component response regulator, CopR BAC0487 Protein 2e-26 42
PADK2_10370 YP_006482063.1 two-component response regulator, CopR NC_002516.2.879194.p Protein 9e-25 42
PADK2_10370 YP_006482063.1 two-component response regulator, CopR HE999704.1.gene1528. Protein 3e-25 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PADK2_10370 YP_006482063.1 two-component response regulator, CopR VFG0596 Protein 1e-52 57
PADK2_10370 YP_006482063.1 two-component response regulator, CopR VFG1390 Protein 1e-36 46
PADK2_10370 YP_006482063.1 two-component response regulator, CopR VFG1389 Protein 2e-28 43
PADK2_10370 YP_006482063.1 two-component response regulator, CopR VFG0473 Protein 1e-27 41