Gene Information

Name : PADK2_10090 (PADK2_10090)
Accession : YP_006482007.1
Strain : Pseudomonas aeruginosa DK2
Genome accession: NC_018080
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2179242 - 2179925 bp
Length : 684 bp
Strand : -
Note : COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component

DNA sequence :
ATGAGCGCCAGCATTCTCAACGCGCAGAACCTTAGCAAGGTTGTCGGTAGCGCGGAAGGCAAGTTGACCATCCTCCACGA
CCTCTCCCTCGACCTCGCCCGCGGCGACAGCCTGGCGATCGTCGGCAGCTCCGGCTCCGGCAAGTCGACCCTGCTCGGCC
TGCTCGCCGGGCTCGACCAGCCCAGCGGCGGCGAGGTCCGTCTCGCCGGGCACGCCCTCGGCGACCTCGACGAGGACCAG
CGGGCGCGCGTCCGCGCGGCCCATGTAGGCTTCGTGTTCCAGTCGTTCCAGTTGCTCGACAGCCTCGATGCGCTGGAGAA
CGTGATGCTGCCCCTGGAGCTGGAAGGCCGCGCCGACGCTCGCCAGCGCGCCAGAGAACTGCTCGAGCGAGTCGGCCTCG
GCCAACGCCTGGGCCACTATCCGCGCCAGCTCTCCGGCGGCGAGCAGCAGCGGGTCGCCATTGCCCGTGCCTTCGCGGCG
GAGCCGGACGTGCTGTTCGCCGACGAACCCACCGGCAACCTCGACAGCGCCACCGGCGAGCGGATCAGCGACCTGCTCTT
CGAACTCAACCGCGAACGCGGTACCACCCTGGTTCTGGTTACCCACGACGAGCGTCTGGCGCATCGCTGCCGGCGCCTGA
TCCGTCTGGAAAGCGGACGCCTGATCGACCGGGTCGAACCCTGA

Protein sequence :
MSASILNAQNLSKVVGSAEGKLTILHDLSLDLARGDSLAIVGSSGSGKSTLLGLLAGLDQPSGGEVRLAGHALGDLDEDQ
RARVRAAHVGFVFQSFQLLDSLDALENVMLPLELEGRADARQRARELLERVGLGQRLGHYPRQLSGGEQQRVAIARAFAA
EPDVLFADEPTGNLDSATGERISDLLFELNRERGTTLVLVTHDERLAHRCRRLIRLESGRLIDRVEP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-26 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 8e-22 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-27 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-27 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-27 41
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 1e-10 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PADK2_10090 YP_006482007.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-30 48
PADK2_10090 YP_006482007.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 7e-33 45