Gene Information

Name : PADK2_09420 (PADK2_09420)
Accession : YP_006481873.1
Strain : Pseudomonas aeruginosa DK2
Genome accession: NC_018080
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2043430 - 2044113 bp
Length : 684 bp
Strand : +
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence : 
ATGAATGACAAGTCGGTGCTGAGTTGCCGCAACCTGAGCAAGAGCTACGACGAGGGGCCGCAATCGGTGCAGGTGCTGTC
CGGCGTCGAGTTGAACCTGCTGCCTGGGGAGCGGGTGGCTATCGTCGGCAGCTCCGGTTCGGGCAAGAGCACCTTGCTGA
ACATGCTCGGCGGCCTGGACACGCCCTCCGCCGGCAGCGTCTGGCTCGCCGGCGAGGAACTCTCGGCGCTGAACGAGACG
GCCCGCGGGCTGCTGCGCAACCGCGCGCTGGGCTTCGTCTACCAGTTCCACCACCTGTTGCCGGAGTTCACCGCCCTGGA
GAACGTCTGCATGCCGCTGTTGATCGGCCGCACGCCGATCGTGGAAGCCCGCCAGCGGGCGGCCGAGCTGCTGGAGCGGG
TCGGGCTGGGGCATCGCCTGTCGCACAAGCCGGCCGAGCTGTCCGGCGGCGAGCGCCAGCGGGTGGCGATCGCCCGCGCG
CTGGTCAACCGTCCGCAGCTGGTACTGCTCGACGAGCCCACCGGCAACCTCGACCAGCATACCGCCCAGGGTATCCAGGA
GCTGATGCTGGAACTGAGCCGTTCGTTGCAGACCTCGTTCCTGGTGGTAACCCACGATCTCCAGCTGGCCGGGCACATGG
ATCGCATCCTGCGCCTGGAAGAAGGCCGACTGATCGCCGCGTAG

Protein sequence : 
MNDKSVLSCRNLSKSYDEGPQSVQVLSGVELNLLPGERVAIVGSSGSGKSTLLNMLGGLDTPSAGSVWLAGEELSALNET
ARGLLRNRALGFVYQFHHLLPEFTALENVCMPLLIGRTPIVEARQRAAELLERVGLGHRLSHKPAELSGGERQRVAIARA
LVNRPQLVLLDEPTGNLDQHTAQGIQELMLELSRSLQTSFLVVTHDLQLAGHMDRILRLEEGRLIAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-28 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-30 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-30 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-30 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PADK2_09420 YP_006481873.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 8e-39 44
PADK2_09420 YP_006481873.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 4e-33 44