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Name : PADK2_08625 (PADK2_08625) Accession : YP_006481720.1 Strain : Pseudomonas aeruginosa DK2 Genome accession: NC_018080 Putative virulence/resistance : Virulence Product : nucleotide sugar epimerase/dehydratase WbpM Function : - COG functional category : - COG ID : - EC number : - Position : 1862572 - 1864566 bp Length : 1995 bp Strand : + Note : COG1086 Predicted nucleoside-diphosphate sugar epimerases DNA sequence : TTGGATAATTTGAGGATGAAGCTCCTGGGATTGCCGCGTCGCTACAAGCGAATGCTGCAAGTCGCCGCCGATGTGAGCCT TGTTTGGCTATCGCTCTGGCTAGCCTTCCTAGTCAGGCTGGGCACGGAAGACATGATCAGCCCCTTCGGCGGCCATGCCT GGCTGTTCATCGCCGCCCCGTTGGTGGCCATTCCCCTGTTCATCCGCTTCGGCATGTACCGGGCGGTGATGCGCTACCTG GGCAACGACGCCCTTATCGCGATCGCCAAGGCCGTCACCATTTCCGCGCTGGTCCTGTCGTTGCTGGTCTACTGGTACCG CTCCCCGCCGGCGGTGGTGCCGCGTTCCCTGGTGTTCAACTACTGGTGGTTGAGCATGCTGCTGATCGGCGGCTTGCGTC TGGCCATGCGCCAGTATTTCATGGGCGACTGGTACTCTGCTGTGCAGTCGGTACCATTTCTCAATCGCCAGGATGGCCTG CCCAGGGTGGCCATCTATGGCGCGGGGGCGGCCGGCAACCAGTTGGTTGCGGCATTGCGTCTCGGTCGGGCGATGCGTCC GGTGGCGTTCATCGATGACGACAAGCAGATCGCCAACCGGGTCATCGCCGGTCTGCGGGTCTATACCGCCAAGCATATCC GCCAGATGATCGACGAGACGGGCGCGCAGGAGGTTCTCCTGGCGATTCCTTCCGCCACTCGGGCCCGGCGCCGAGAGATT CTCGAGTCCCTGGAGCCGTTCCCGCTGCACGTGCGCAGCATGCCTGGCTTCATGGACCTGGCCAGCGGTCGGGTCAAGGT GGACGACCTGCAGGAGGTGGACATCGCTGACCTGCTGGGGCGCGACAGCGTCGCACCGCGCAAGGAGCTGCTGGAACGGT GCATCCGCGGTCAGGTGGTGATGGTGACCGGGGCGGGCGGTTCTATCGGTTCGGAACTCTGTCGGCAGATCATGAGTTGT TCGCCTAGCGTGCTGATCCTGTTCGAGCACAGCGAATACAACCTCTACAGCATCCATCAGGAACTGGAGCGTCGGATCAA GCGCGAGTCGCTTTCGGTGAACCTGTTGCCGATCCTCGGTTCGGTGCGCAATCCCGAGCGCCTGGTGGACGTGATGCGTA CCTGGAAGGTCAATACCGTCTACCATGCGGCGGCCTACAAGCATGTGCCGATCGTCGAGCACAACATCGCCGAGGGCGTT CTCAACAACGTGATAGGCACCTTGCATGCGGTGCAGGCCGCGGTGCAGGTCGGCGTGCAGAACTTCGTGCTGATTTCCAC CGACAAGGCGGTGCGGCCGACCAATGTGATGGGCAGCACCAAGCGCCTGGCGGAGATGGTCCTTCAGGCGCTCAGCAACG AATCGGCGCCGGTGCTGTTCGGTGACCGGAAGGACGTGCATCACGTCAACAAGACCCGTTTCACCATGGTCCGCTTCGGC AACGTCCTCGGTTCGTCCGGCTCGGTCATTCCGCTGTTCCGCGAGCAGATCAAGCGCGGCGGCCCGGTGACGGTCACCCA CCCGAGCATCACCCGTTACTTCATGACCATTCCCGAGGCGGCGCAGTTGGTCATCCAGGCCGGTTCGATGGGGCAGGGCG GAGATGTATTCGTGCTGGACATGGGGCCGCCGGTGAAGATCCTGGAGCTCGCCGAGAAGATGATCCACCTGTCCGGCTTG AGCGTGCGTTCCGAGCGTTCGCCCCATGGTGACATCGCCATCGAGTTCAGTGGCCTGCGTCCTGGCGAGAAGCTCTACGA AGAGCTGCTGATCGGTGACAACGTGAATCCCACCGACCATCCGATGATCATGCGGGCCAACGAGGAACACCTGAGCTGGG AGGCCTTCAAGGTCGTGCTGGAGCAGTTGCTGGCCGCCGTAGAGAAGGACGACTACTCGCGGGTTCGCCAGTTGCTGCGG GAAACCGTCAGCGGCTATGCGCCTGACGGTGAAATCGTCGACTGGATCTATCGCCAGAGGCGGCGAGAACCCTGA Protein sequence : MDNLRMKLLGLPRRYKRMLQVAADVSLVWLSLWLAFLVRLGTEDMISPFGGHAWLFIAAPLVAIPLFIRFGMYRAVMRYL GNDALIAIAKAVTISALVLSLLVYWYRSPPAVVPRSLVFNYWWLSMLLIGGLRLAMRQYFMGDWYSAVQSVPFLNRQDGL PRVAIYGAGAAGNQLVAALRLGRAMRPVAFIDDDKQIANRVIAGLRVYTAKHIRQMIDETGAQEVLLAIPSATRARRREI LESLEPFPLHVRSMPGFMDLASGRVKVDDLQEVDIADLLGRDSVAPRKELLERCIRGQVVMVTGAGGSIGSELCRQIMSC SPSVLILFEHSEYNLYSIHQELERRIKRESLSVNLLPILGSVRNPERLVDVMRTWKVNTVYHAAAYKHVPIVEHNIAEGV LNNVIGTLHAVQAAVQVGVQNFVLISTDKAVRPTNVMGSTKRLAEMVLQALSNESAPVLFGDRKDVHHVNKTRFTMVRFG NVLGSSGSVIPLFREQIKRGGPVTVTHPSITRYFMTIPEAAQLVIQAGSMGQGGDVFVLDMGPPVKILELAEKMIHLSGL SVRSERSPHGDIAIEFSGLRPGEKLYEELLIGDNVNPTDHPMIMRANEEHLSWEAFKVVLEQLLAAVEKDDYSRVRQLLR ETVSGYAPDGEIVDWIYRQRRREP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 2e-85 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PADK2_08625 | YP_006481720.1 | nucleotide sugar epimerase/dehydratase WbpM | VFG0029 | Protein | 2e-120 | 46 |
