Gene Information

Name : PADK2_06240 (PADK2_06240)
Accession : YP_006481243.1
Strain : Pseudomonas aeruginosa DK2
Genome accession: NC_018080
Putative virulence/resistance : Virulence
Product : DNA mismatch repair protein MutS
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1350238 - 1352805 bp
Length : 2568 bp
Strand : -
Note : COG0249 Mismatch repair ATPase (MutS family)

DNA sequence :
ATGACCGACCTCTCTCAGCACACGCCAATGATGCAGCAGTACTTCAAACTGAAGCATCAGCACCCCGACCAATTGATGTT
CTATCGCATGGGCGACTTCTACGAGCTGTTCTACGAGGACGCGAAGAAGGCCGCCAAGCTGCTCGACATCACCCTGACCG
CGCGCGGCCAGTCCGGCGGCAAGGCGATCCCGATGGCAGGCATTCCCTTCCATTCGGCGGAGGGCTACCTGGCCAAGCTG
GTCAAGCTCGGCGAGTCGGTGGCGATCTGCGAGCAGATCGGCGACCCGGCCACCAGCAAGGGGCCGGTGGAGCGCCAGGT
GGTGCGGATCATCACCCCCGGCACGGTGAGCGACGAGGCGCTGCTCGACGAACGCCGCGACAACCTGCTGGCGGCAATCC
TCGGCGACGAGCGCCTGTTCGGCCTCGCCGTGCTGGACATCACCAGCGGCCGCTTCAGCGTCCAGGAGATAAAAGGCTGG
GAAACCCTGCTGGCCGAACTGGAGCGCCTCAACCCGGCCGAGCTGCTGATTCCCGACGACTGGCCACAGGGCCTGCCGGC
GGAGAAGCGCCGCGGCGTACGTCGCCGCGCGCCGTGGGACTTCGATCGCGACTCGGCGCACAAGAGCCTCTGCCAGCAAT
TCGGCACCCAGGACCTGAAAGGCTTCGGCTGCCAGAACCTGACCCTGGCCATCGGCGCCGCCGGCTGCCTGCTCGCCTAC
GCCAAGGAAACCCAGCGTACCGCCCTGCCGCACCTGCGCAGCCTGCGCCACGACCGCCTCGATGACACGGTGATCCTCGA
CGGTGCCAGCCGCCGCAACCTGGAGCTGGATATCAACCTCAGCGGTGGCCGCGAGAACACCCTGCAATCGGTGGTCGACC
GCTGCCAGACCGCCATGGCCAGCCGCCTGATGAGCCGCTGGCTGAACCGTCCGCTGCGTGACCGCGCGGTACTGGAAGCC
CGCCAGGAGTCCATCGCCTGCCTGCTGGAACGCTACCGCTTCGAGAACCTGCAACCGCAGCTCAAGGAAATCGGCGACCT
CGAACGCATCCTCGCCCGCATCGGCCTGCGCAACGCCCGCCCTCGCGACCTGGCGCGCCTGCGCGACGCGCTGGCGGCGC
TGCCGGACCTGCAGAACGCCATGACCGAACTGGAAGCGCCGCACCTGCAGGCGCTGGCCACCACCATCGGCACCTATCCC
GAACTCGCCGAACTGCTGGCCAAGGCGATCATCGACAACCCGCCGGCGGTGATCCGCGACGGTGGCGTGATCAAGACCGG
CTATGACGCCGAGCTGGACGAGCTGCAGGCGCTGAGCGAAAACGCCGGGCAATTCCTGATGGACCTGGAAGCGCGCGAGA
AGGCCCGCACCGGCCTGCCCAACCTGAAGGTCGGCTACAACCGCATCCATGGCTACTTCATCGAGCTGCCACGGGTGCAG
GCCGAACAGGCGCCGGCCGACTACATCCGCCGGCAGACCCTGAAAGGCGCCGAGCGCTTCATCACGCCGGAACTGAAGGC
CTTCGAGGACAAGGCGCTGTCGGCCCAGAGCCGCGCCCTGGCCCGCGAGAAGGCACTCTACGAAGAGCTGCTGGAACGTC
TGATCGGCCACCTCGCTCCGCTCCAGGACAGCGCCTCGGCGCTGGCGGAGCTGGACGTGCTGGCGAATCTCGCCGAACGC
GCGCTGAACCTCGACCTGAATCGCCCGCGGTTCGTCGAACACACCTGCCTGCACATCGAGCAGGGCCGCCATCCGGTGGT
CGAGCAGGTGCTGGAGACACCGTTCGTGGCCAACGACCTGGCGCTGGATGCCGACACCCGGATGCTGGTGATCACCGGTC
CGAACATGGGCGGTAAATCCACCTACATGCGGCAAACCGCGCTGATCGTGCTGCTTGCGCACATCGGCAGCTTCGTTCCG
GCTGCACGCTGCGAGCTGTCCCTGGTGGACCGCATCTTCACCCGCATCGGCTCGTCCGACGACCTTGCCGGCGGCCGCTC
GACCTTCATGGTGGAGATGAGCGAAACCGCCAACATCCTGCACAACGCCACTGACAAGAGCCTGGTGCTGATGGATGAGG
TCGGCCGCGGCACCAGCACCTTCGACGGCCTGTCGCTGGCCTGGGCAGCGGCCGAGGACCTGGCCCGGACTCGCGCCTTC
ACCCTGTTCGCCACCCACTATTTCGAACTGACCGTACTGCCGGAAAGCCAGCCCGCGGTAGCCAACGTGCACCTGAACGC
GACCGAGCACAATGAACGCATCGTGTTCCTGCACCATGTACTGCCGGGACCGGCGAGCCAGAGCTACGGCCTCGCGGTGG
CCCAGTTGGCCGGCGTGCCGGCCCCGGTAATCCAGCGCGCCCGCGAACACCTCAAGCGCCTGGAAACCACCAGCCTGCCG
CACGAGATGCCGAGCCAGCAGAGCGGCAAGCCCGCCTCGCCGATGCAGAGCGACCTGTTCGCCAGCCTGCCGCACCCGGT
GATCGATGAATTGTCGAGGATCAATCCCGACGATATCAGCCCGCGGCAAGCTCTCGATCTGTTATATGCATGGAAGATGC
GGGTCTGA

Protein sequence :
MTDLSQHTPMMQQYFKLKHQHPDQLMFYRMGDFYELFYEDAKKAAKLLDITLTARGQSGGKAIPMAGIPFHSAEGYLAKL
VKLGESVAICEQIGDPATSKGPVERQVVRIITPGTVSDEALLDERRDNLLAAILGDERLFGLAVLDITSGRFSVQEIKGW
ETLLAELERLNPAELLIPDDWPQGLPAEKRRGVRRRAPWDFDRDSAHKSLCQQFGTQDLKGFGCQNLTLAIGAAGCLLAY
AKETQRTALPHLRSLRHDRLDDTVILDGASRRNLELDINLSGGRENTLQSVVDRCQTAMASRLMSRWLNRPLRDRAVLEA
RQESIACLLERYRFENLQPQLKEIGDLERILARIGLRNARPRDLARLRDALAALPDLQNAMTELEAPHLQALATTIGTYP
ELAELLAKAIIDNPPAVIRDGGVIKTGYDAELDELQALSENAGQFLMDLEAREKARTGLPNLKVGYNRIHGYFIELPRVQ
AEQAPADYIRRQTLKGAERFITPELKAFEDKALSAQSRALAREKALYEELLERLIGHLAPLQDSASALAELDVLANLAER
ALNLDLNRPRFVEHTCLHIEQGRHPVVEQVLETPFVANDLALDADTRMLVITGPNMGGKSTYMRQTALIVLLAHIGSFVP
AARCELSLVDRIFTRIGSSDDLAGGRSTFMVEMSETANILHNATDKSLVLMDEVGRGTSTFDGLSLAWAAAEDLARTRAF
TLFATHYFELTVLPESQPAVANVHLNATEHNERIVFLHHVLPGPASQSYGLAVAQLAGVPAPVIQRAREHLKRLETTSLP
HEMPSQQSGKPASPMQSDLFASLPHPVIDELSRINPDDISPRQALDLLYAWKMRV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mutS AAA80578.1 DNA mismatch repair protein Virulence SPI-1 Protein 0.0 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PADK2_06240 YP_006481243.1 DNA mismatch repair protein MutS VFG0562 Protein 0.0 60