Gene Information

Name : xerD (PADK2_05645)
Accession : YP_006481124.1
Strain : Pseudomonas aeruginosa DK2
Genome accession: NC_018080
Putative virulence/resistance : Unknown
Product : site-specific tyrosine recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1215829 - 1216725 bp
Length : 897 bp
Strand : +
Note : COG4974 Site-specific recombinase XerD

DNA sequence :
ATGAGTACCCTCGAACATCCCCTGATCGACCGTTTCCTCGATGCCCTGTGGCTGGAAAAAGGCCTTGCCGACAACACCCG
CGAGGCTTATCGCAACGACCTCCAGCAGTTCAACGCCTGGCTCGATGGTCGCGGGCTGCGCCTGGAGGGCATCGGCCGCG
ACGCGATCCTCGATCACCTGGCCTGGCGCCTGGAGCAGGGCTACAAGGCCCGCTCGACCGCGCGCTTCCTCTCCGGCCTG
CGTGGCTTCTATCGCTATTGCCTGCGCGACGGCCTGATCGCCGAGGATCCCACCTTGCAGGTGGACCTGCCGCAACTGGG
CAAGCCGTTGCCGAAATCCCTCTCCGAAGCGGACGTCGAGGCATTGCTGGCGGCGCCGGAAGTCGACGACCCGCTGGGCC
TGCGCGATCGCACCATGCTCGAAGTGCTGTATGCCTGCGGCCTGCGGGTCAGCGAACTGGTCGGCCTGACCCTGGAGCAG
GTCAACCTGCGCCAGGGCGTGGTCAAGGTGTTCGGCAAGGGCAGCAAGGAGCGCCTGGTGCCGCTCGGCGAGGAAGCCAT
CGGCTGGCTCGAACGCTACCTGCGCGAGGCCCGCGGCGACCTGCTCGGCGGGCGGCCCAGCGACGTGCTGTTCCCCAGCC
TGCGCGGCGAACAGATGACCCGCCAGACCTTCTGGCATCGCATCAAGCATCACGCGCAGGTGGCGGCGATCGGCACGTCG
ATTTCGCCGCACACCCTGCGCCACGCCTTCGCCACCCACCTGCTCAACCATGGCGCCGACCTGCGGGTGGTGCAGATGCT
GCTCGGCCACAGCGACCTGTCGACCACCCAGATCTATACCCATATCGCCCGGGCCCGCCTCCAGGATCTGCACGCACGCC
ACCACCCGCGAGGCTGA

Protein sequence :
MSTLEHPLIDRFLDALWLEKGLADNTREAYRNDLQQFNAWLDGRGLRLEGIGRDAILDHLAWRLEQGYKARSTARFLSGL
RGFYRYCLRDGLIAEDPTLQVDLPQLGKPLPKSLSEADVEALLAAPEVDDPLGLRDRTMLEVLYACGLRVSELVGLTLEQ
VNLRQGVVKVFGKGSKERLVPLGEEAIGWLERYLREARGDLLGGRPSDVLFPSLRGEQMTRQTFWHRIKHHAQVAAIGTS
ISPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHIARARLQDLHARHHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 5e-65 54
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 5e-65 54