Gene Information

Name : A3UG_20195 (A3UG_20195)
Accession : YP_006479451.1
Strain : Enterobacter cloacae SDM
Genome accession: NC_018079
Putative virulence/resistance : Virulence
Product : DNA-binding transcriptional regulator BasR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4356367 - 4357029 bp
Length : 663 bp
Strand : +
Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence : 
ATGAAACTACTTATAGTTGAAGACGATCTGTTATTACAGGAAGGGCTTGCGCTTGCGCTGGCCAATGAAGGATATGCCCT
CGACTGCGCCGCCACGGCGGCAGAGGCGGATGCCCTGATCCAGAGCGGGGAATACAGTCTGGTGATCCTCGATCTTGGCT
TACCAGATAAAGACGGTGCCACATTGTTAAGCCAGTGGCGCCGCCGCGGTGTCGACAACCCGGTGTTGATCCTGACGGCA
CGTGATGCCATCGAAGATCGTATCAACGGCCTTGATTCCGGCGCGGATGATTATCTGGTGAAGCCTTTTGCCCTCGCAGA
GCTACAGGCACGCGTGCGGGCGTTAATCCGCCGCTATCAGGGGCATAGTGATAACTTACTCACCGACGGGGATATTACGC
TGAATCTGCAAACCCAACAGGTGCTGCGTGAGTCCCAGCCCGTTGAGGTCACCCCCAAAGAGTTCGCTCTGCTTACGCGT
CTGATCATGCGGAGCGGACAGACGGTACACCGAGAAACCCTCCAGCAGGATATTTACTCCTGGCAAGATGATCCGGGGTC
AAACACCCTTGAAGTGCACATTCACAATCTGCGGCGCAAACTCGGTAAAGACAGAATAAAAACCGTACGCGGTGTGGGCT
ATCGTCTGGAGAGCCAGAAATGA

Protein sequence : 
MKLLIVEDDLLLQEGLALALANEGYALDCAATAAEADALIQSGEYSLVILDLGLPDKDGATLLSQWRRRGVDNPVLILTA
RDAIEDRINGLDSGADDYLVKPFALAELQARVRALIRRYQGHSDNLLTDGDITLNLQTQQVLRESQPVEVTPKEFALLTR
LIMRSGQTVHRETLQQDIYSWQDDPGSNTLEVHIHNLRRKLGKDRIKTVRGVGYRLESQK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 5e-35 47
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 4e-27 43
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 1e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A3UG_20195 YP_006479451.1 DNA-binding transcriptional regulator BasR BAC0487 Protein 9e-57 69
A3UG_20195 YP_006479451.1 DNA-binding transcriptional regulator BasR BAC0197 Protein 2e-28 43
A3UG_20195 YP_006479451.1 DNA-binding transcriptional regulator BasR BAC0083 Protein 4e-27 42
A3UG_20195 YP_006479451.1 DNA-binding transcriptional regulator BasR BAC0347 Protein 6e-26 42
A3UG_20195 YP_006479451.1 DNA-binding transcriptional regulator BasR NC_002516.2.879194.p Protein 3e-28 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A3UG_20195 YP_006479451.1 DNA-binding transcriptional regulator BasR VFG0473 Protein 9e-51 59
A3UG_20195 YP_006479451.1 DNA-binding transcriptional regulator BasR VFG0596 Protein 2e-27 43
A3UG_20195 YP_006479451.1 DNA-binding transcriptional regulator BasR VFG1390 Protein 3e-23 42