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Name : A3UG_01810 (A3UG_01810) Accession : YP_006475817.1 Strain : Enterobacter cloacae SDM Genome accession: NC_018079 Putative virulence/resistance : Virulence Product : Outer membrane usher protein PmfC Function : - COG functional category : - COG ID : - EC number : - Position : 391291 - 393765 bp Length : 2475 bp Strand : + Note : COG3188 P pilus assembly protein, porin PapC DNA sequence : ATGTCAGTAAAATTAAAAACGAATCTTACAATTATTGCTCTCCTGGTGATGAATTGCTGCTATGCAGCAATGGCGCGCGG AGAAGAGCGCGTTGAGTTTAATACTGATGTTCTGGATGCTTCAGATCGTACCCGTATTGATCTGTCACGTTTTGCGACAG ATAACTATGTCACACCTGGTGATTATCTGCTGGATATCCGTGTTAACGGCCAGTCGGTAGGCCAGGAGAAAATCCGTTAT GTGGAATCGCCTGAAGGCAATCGTACGCTGCCGTGTATCAGCGGTGACCTGCTGGACAAACTGGCGCTGAAAGAAGGCGC ACGTTCACAGATCGCTCAAATCTATGAAAACTGCTATTCCCTGCAGCGTTTGTCGGGCGCGAAATTAAGCAACTATGCCG GCGTGCTTGATATCACCGTGCCGCAGGCATGGATGAAGTACAACGATCCTGACTGGACGCCGCCTGAACGTTGGGATGAA GGTATTGCCGGCCTGATTTTTGACTACAGCATTAACGGGCAGCTGACTCGTCAATTCAGCGACAATAAAAACTACAGCGC GATATCAGGTTACGGTCAGGCGGGAGCTAACATCGGCGGCTGGCGCATACGCGGTGAATATCAGACCAGCTACTACAGCC AGCACCATCAATCCAGTTTTGACTGGAACCAGATCTACGCCTACCGGCCGTTGCCGATGATGGCGGCAAAACTGACGCTG GGGGAGATTTACCTGAACTCGCAGGTTTTCGATACGCTGCGATTTACCGGGATTAACCTCGCCAGCGATGAGCGGATGCT GCCGCCTGCGCTGCAGGGCTATGCGCCTGAAATCCACGGTATTGCTCGCTCGAATGCCAAAGTGACCGTCAGTCAGAGCG GGCGCGTCATCTATGAAACTACCGTCCCCGCCGGACCGTTCAATATTCAGGATTTGCGCAGTTCAGTGCGCGGTACGCTC GATGTACGCGTTGAGGAGCAGGATGGCTCGGTATCGCTGTTCCAGGTGAATACCGCCAGCATTCCGTATCTCACGCGTCC GGGCTATGTTCGTTACAACCTCTCTGGTGGCACGCCGTCCCGCTATAACCACTCGCTAAAGGGACCGACGTTCCTGTCTG GCGATTTCTCCTGGGGGATCAGCAACGCGTGGTCGCTGTACGGTGGCCTGCAGTCATCGGGTGAAGCCTACACTGCAGCA TCTGTGGGTATAGGTCGTGATCTGAACGCGTTAGGGGCGATCTCTCTGGACGCCACAGAGTCGTGGAGCCGTGAGCCTGA CGGCAAACGCCTGAAAGGTACCTCATATAAGTTGAGCTACGCGAAAACCTTCGACGAATACAACAGCTCAATTACGTTCG CGGGGTACCGCTTCTCACAGGAAGACTTCCGCACGATGACGCAATACCTTGATGAGCGTTATCAGGGTTATGACCATGTC GGACGCGAGAAACAGCTCTACACCATTACCGGGAGTAAAACCTTCTGGGCCGGTGAGGCGGGTAAAGCGACGACCGTCTT TCTTACCTGGACCCACCAAAACTACTGGAATCAGCGCAGCCAGGATCGATACGGCATGTCCGTGGGGCGAGCCTTCCGCA TTGGCGATATCAACGGCATCAACGCCAATCTTTCTGCTTACCGTACTGATTATAAAGGGCGTAAGGACGACTCAATCTCC CTCTCGCTGTCTGTGCCGATTGGGGATAACACATGGGCGGGTCTGGACGTCCAGACCAACAACGGTAAAACCAGTCCAAT GGCGTCATACACCGACAACAGCGACTTCAACAATCTGTGGCGCGTTCGCGCGGGTGCCAGTCAGAACAGTAACGCCAGCG TTGACGGCTATTACCTGCACCGTTCGCAGTGGGCGGAGATTAATACCAACGCAAGCTACCAGCAAAATGAGTTTATGGCG TTAAGCACCACTCTGCGCGGCGGCTTTACGGCGACCCGGCACGGTGCGGCGATGCATAACAGTGGCGCAACAATGAACAC GGCGCGGGTCATGGTCGATACCAACGGCATTGGCGGCGTCCCACTCAATGGTGAAAAGTCCCGGACTAACCGCTTCGGTA TTGCCGTTGTACCGGATGTAGTGAGTTACAACAGCTTTGATACCCGCGTAGACGTCGACGCCATGGATGGCGATATCGAA CCGGCCAGAGCCATCAGTACCAGCACCCTGACTGAAGGGGCCATCGGCTATCAGGCTTTTGGGATGGCGAAAGGGATGAA AATGATGGGCACGTTGCGCCTCGTTGATAACAGCGTCCCTCCTTTTGGGGCAGAAATTTACAACGCCGATGGCGTAAGCG TCGCCATGGTGCTGGAGGACGGAAAGGCATGGCTTGCGGGCATAAACACTAATGAAACCCTGAATGTTATGTGGGGGGGC AAACAGCAGTGCAAAGTAACCGTCCCGCCTGGAGAGAACAACGGACGTTCGGACATGCTTCTGCCGTGCCGTTAA Protein sequence : MSVKLKTNLTIIALLVMNCCYAAMARGEERVEFNTDVLDASDRTRIDLSRFATDNYVTPGDYLLDIRVNGQSVGQEKIRY VESPEGNRTLPCISGDLLDKLALKEGARSQIAQIYENCYSLQRLSGAKLSNYAGVLDITVPQAWMKYNDPDWTPPERWDE GIAGLIFDYSINGQLTRQFSDNKNYSAISGYGQAGANIGGWRIRGEYQTSYYSQHHQSSFDWNQIYAYRPLPMMAAKLTL GEIYLNSQVFDTLRFTGINLASDERMLPPALQGYAPEIHGIARSNAKVTVSQSGRVIYETTVPAGPFNIQDLRSSVRGTL DVRVEEQDGSVSLFQVNTASIPYLTRPGYVRYNLSGGTPSRYNHSLKGPTFLSGDFSWGISNAWSLYGGLQSSGEAYTAA SVGIGRDLNALGAISLDATESWSREPDGKRLKGTSYKLSYAKTFDEYNSSITFAGYRFSQEDFRTMTQYLDERYQGYDHV GREKQLYTITGSKTFWAGEAGKATTVFLTWTHQNYWNQRSQDRYGMSVGRAFRIGDINGINANLSAYRTDYKGRKDDSIS LSLSVPIGDNTWAGLDVQTNNGKTSPMASYTDNSDFNNLWRVRAGASQNSNASVDGYYLHRSQWAEINTNASYQQNEFMA LSTTLRGGFTATRHGAAMHNSGATMNTARVMVDTNGIGGVPLNGEKSRTNRFGIAVVPDVVSYNSFDTRVDVDAMDGDIE PARAISTSTLTEGAIGYQAFGMAKGMKMMGTLRLVDNSVPPFGAEIYNADGVSVAMVLEDGKAWLAGINTNETLNVMWGG KQQCKVTVPPGENNGRSDMLLPCR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pixC | CAE85159.1 | PixC protein | Not tested | PAI V 536 | Protein | 1e-153 | 45 |
| prfC | CAD42029.1 | PrfC protein | Virulence | PAI II 536 | Protein | 3e-148 | 42 |
| papC | YP_854254.1 | outer membrane usher protein PapC | Virulence | PAI I APEC-O1 | Protein | 3e-147 | 42 |
| papC | AAZ04424.1 | outer membrane usher protein | Virulence | PAI I APEC-O1 | Protein | 2e-147 | 42 |
| papC | NP_755465.1 | PapC protein | Virulence | PAI I CFT073 | Protein | 8e-148 | 42 |
| papC_2 | NP_757034.1 | PapC protein | Virulence | PAI II CFT073 | Protein | 7e-148 | 42 |
| papC | YP_002414015.1 | Outer membrane usher protein PapC | Not tested | Not named | Protein | 4e-148 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| A3UG_01810 | YP_006475817.1 | Outer membrane usher protein PmfC | VFG1548 | Protein | 2e-148 | 42 |
| A3UG_01810 | YP_006475817.1 | Outer membrane usher protein PmfC | VFG0884 | Protein | 3e-148 | 42 |
| A3UG_01810 | YP_006475817.1 | Outer membrane usher protein PmfC | VFG0895 | Protein | 3e-148 | 42 |
