Gene Information

Name : A3UG_17330 (A3UG_17330)
Accession : YP_006478890.1
Strain : Enterobacter cloacae SDM
Genome accession: NC_018079
Putative virulence/resistance : Unknown
Product : integrase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3742044 - 3743294 bp
Length : 1251 bp
Strand : +
Note : COG0582 Integrase

DNA sequence : 
ATGGAAACCCGGCAATGGCAAGACAAACCTCTATCCGTTAAAGAAATCGAATCTGCTAAACCCAAGGGAGCGGACTACGT
TCTCTATGATGGCGATGGCCTTGAGCTACTTATCAAATCCAGCGGGAGTAAAATCTGGCAGTTTCGCTACATTCGCCCTG
TCACCAAGAAATGTGCGAAAAAGAGCATAGGCCCCTACCCGTCGGTTACGCTTGCCGATGCCAGAAACTATCGGGCAGAG
TCTCGCTCTCTCCTTGCGAAACAAATCGATCCACAGGAACATCAGCAAGAACAACTTCGCAGTTCGCTTGAAGCTAAAAC
CAATACTTTCCAACTCGTGGCTGAACGATGGTGGAATGTGAAGAAAGCCGGCGTGACAGAGGACTATGCCGACGATATCT
GGCGCTCTCTTGAAAGAGATGTCTTTCCTGCAATTGGCGACATTAGCGTTACAGATATTAAAGCTCACACACTGGTTCAG
GCCATCCAACCAGTTCAGGCCAGAGGAGCACTGGAAACCGTTCGTCGCCTGTGCCAACGCATTAATGAGGTCATGATCTA
TGCCCAAAACACAGGACTGATTGATGCTGTTCCCAGCGTTAATATCGGTAAAGCCTTCGAGAAGCCTCAGAAAAAGAACA
TGCCCAGCATTCGACCAGATCAGCTACCTCAACTGATGCATACAATGCGAACAGCCAGCATTAGCCTTTCCACACGCTGC
CTGTTCATGTGGCAACTTCTTACTATTACCCGCCCTGCCGAAGCGGCTGAAGCTCGCTGGGAAGAGGTAGACATAGAAGC
GCGAGAGTGGAAAATTCCTGCAGCACGCATGAAAATGAACCGCGACCATACTGTGCCCTTGTCAGATGAAGCAATAGCTG
TGCTGGAGATGATGGAGCCGTTAAGCGGGAACCGAGAATTTATCTTTCCTAGCCGTATTAAGCCCAACCAGCCAATGAAT
AGCCAGACCGTTAACGCATCGCTAAAACGTGCAGGTTTTGGTGGTATGCTCGTTTCACACGGTTTGCGTTCTATCGCCAG
TACAGCCCTTAACGAACAGGGTTTTCCACCTGACGTTATTGAAGCGGCATTGGCCCACGTGGATAAGAACGAGGTTCGTC
GTGCGTATAACCGCAGTGATTATCTTGAGCAGCGACGACCTATGATGCAATGGTGGGCTGATTTTATTATAACAACAGAT
AGAGAAAATTTAGTTAAAAGTGGATTAAGAGGAATAAGACTCGTTGGATAA

Protein sequence : 
METRQWQDKPLSVKEIESAKPKGADYVLYDGDGLELLIKSSGSKIWQFRYIRPVTKKCAKKSIGPYPSVTLADARNYRAE
SRSLLAKQIDPQEHQQEQLRSSLEAKTNTFQLVAERWWNVKKAGVTEDYADDIWRSLERDVFPAIGDISVTDIKAHTLVQ
AIQPVQARGALETVRRLCQRINEVMIYAQNTGLIDAVPSVNIGKAFEKPQKKNMPSIRPDQLPQLMHTMRTASISLSTRC
LFMWQLLTITRPAEAAEARWEEVDIEAREWKIPAARMKMNRDHTVPLSDEAIAVLEMMEPLSGNREFIFPSRIKPNQPMN
SQTVNASLKRAGFGGMLVSHGLRSIASTALNEQGFPPDVIEAALAHVDKNEVRRAYNRSDYLEQRRPMMQWWADFIITTD
RENLVKSGLRGIRLVG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAA82714.1 integrase Not tested VPI Protein 4e-98 52
VC0847 NP_230494.1 phage family integrase Not tested VPI-1 Protein 5e-98 52
VC0395_A0372 YP_001216328.1 phage family integrase Not tested VPI-1 Protein 5e-98 52
int AAK20773.1 integrase Not tested VPI Protein 4e-98 52
int AAK20803.1 integrase Not tested VPI Protein 4e-98 52
VC0516 NP_230167.1 phage integrase Not tested VSP-2 Protein 5e-98 48
VPI2_0001 ACA01818.1 phage family integrase Not tested VPI-2 Protein 2e-81 47
VC1758 NP_231394.1 phage family integrase Not tested VPI-2 Protein 8e-81 46
VC0395_A1357 YP_001217300.1 phage family integrase Not tested VPI-2 Protein 8e-81 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A3UG_17330 YP_006478890.1 integrase VFG1092 Protein 3e-81 46