|
Name : A3UG_09350 (A3UG_09350) Accession : YP_006477307.1 Strain : Enterobacter cloacae SDM Genome accession: NC_018079 Putative virulence/resistance : Virulence Product : outer membrane usher protein LpfC Function : - COG functional category : - COG ID : - EC number : - Position : 2026134 - 2028674 bp Length : 2541 bp Strand : + Note : COG3188 P pilus assembly protein, porin PapC DNA sequence : ATGACGGTAAATAACACGATGAAACCCGCACGCCTGGCGATGTTTATCGCCTTAGCGTTTGGCGGATCCTCAACCTCGCT CTACGCCAGTGTTGCCTTTAACACCGAATTAATTGAGCTGGATAATCCAGGCATGGATAAAGCCGATTTGTCGGCCTTTG AATCAGGCTCGCAGGCACCGGGGATCTACCATGTCGATATTATTGTCGACGACGCGTTTCTGGAGACGGGGGATATTCAG TTTACCGCGAGCAAAGCCGACAACGGCGATGCGTCATTGCAACCTTGTCTGAGTCTTGCACAATTAAAACGCTGGGGCGT GAAAACGGCACTATTTCCAGCGCTTGATGCAGAGAAGAGTGAATGCGTCAATCTTCAGGCTATTCCACAGGCTAGTGCGG ATTTTCAGTTTGCTGCCCAGCGTCTGGTGTTGAGTATTCCGCAGGCCGCCATCGATCTGCCGGCAAGAGGCTATGTGCCG CCGGAGATGTGGGATGAAGGGATCACGGCAGCCATGCTCAATTACAGCCTGAGTGGGGCAAACAGCCGGGCGAGAGCGGG TGAGGGGGTCAGTAGCAACACCCAGTATGCGAACCTGCGTCCAGGGGTCAATATCGGGCCGTGGCGTTTACGCAACTACA CCACCTGGTCGCGGGATGCTGCCGGGAAAGATCAATGGGACATGGTCTACAGCTACCTGCAACGTGCCGTGATACCCCTG AAAGCGCAGCTTACACTCGGGGACAGCTCCGCCCCGGCGGATGTCTTTGACAGCGTGCCTTTTCGCGGGGTTCAGCTGGC GTCGGACGATGACATGCTGCCGGACTCCCTGAAAGGCTATGCTCCTGTGGTGCGAGGGATCGCGCGCACCAATGCGCAGG TCGTGATTCGCCAGAATGGCTATCAGATCTACCAAAGCTATGTGGCACCGGGCGCATTTGAAATTACCGATATGTATCCC ACCGGTGGTGCGGGCGATTTAGACGTGACCATCAAAGAGGCGGATGGCAGCGAGCAGCATTTCACGCTGCCGTATGCCTC GGTACCCGTGTTGCAGCGTGAAGGGCGACTGAAATATGCCCTCACCGGCGGACAGTATCGCGCCTATAACAGCAGCGTGG AGAAAACCCCGTTCGGGCAGGTCAGCGGTATTTATGGGCTGCGGAATGGCATTACGCTATATGGCGGGGTGCAGGGTTCC GGCAAGTACCAGTCGTTCGCTGTCGGCACAGGTAAAAACATGGGGGATTTCGGGGCGCTCTCCGCCGATGTCACCCAGGC CTGGTCAACACTGGCCCATACCGCGAAAACGCAGGGGCAATCCTTGCGCGCACGCTACAGCAAGAACGTGCTGAATACCG GCACTAACTTTTCGATTGCAGGATACCGTTATTCAACACGCGGCTATTACGGGCTCCAGGACGTGCTGGACTCGTACGGA GACAGCAGTGCGCTTCAGAACAGACGACGTAACCGCGTGGAGCTGACGATGAGCCAGACGCTGGGTGATGAGCGGGGTGC GCTGACGCTCAGCGCCGCACGGGAAGATTACTGGAACACCGACAAATCAATGGCGTCATGGAGTGTCGGCTACAACAACG ACTGGAACAACATCAGTTATGGTGTGACCTGGACATACAGCAAAAATGGCGGCCCGACCTCATCCGGCAGTGGAAGTACA AAGACCTATGACCACGACCAGTTGCTGGCGTTTACCGTCAGCGTGCCGCTGGATAAATTCCTGCCGCAGACGTGGGCCAA CTATGGCCTGAATACCAGTAAGAACAATGGCACGACGCACAGTATCGGCATGAACGGGGTGGCTCTCGACAATAGCGCGC TGAACTGGAATATCCAGCAAGGTTACGGCACGGATGGCGTGGGGTATACCGGCACGCTGAACGGTGACTACAAAGGCACG TATGGCGAGGTCACGGCGGGATATGGCTACGACAAAAATAGCGAACGCCTTAATTATGGTGTGCAGGGGGGGATCCTCGC CCATGCTGACGGCATAACGCTGTCTCAGCCGCTGGGAGAAACCAATGCGTTAATCAAAGCCCCTGGCGCTCATGGTGTGA ATATTCGTAACCAGTCCGGCGTACGGACGGATTACCGGGGATATACGGTGGTGAATAACCTCTCCGTATACCGCAAAAAC GATCTCGCTCTCGATCCTGAAAATTTGCCTGATGATGTGGAGCTGGAGATCAACACGCGCACGGTCACACCTACACGTGG TGCGGTGGTGAAAGCCGATTATCTGTCCAAAGTCGGACGTCGGGTGCTGATGACGTTGACGACTCATGACCAGTTCGTGC CGTTTGGCGCGGTTGTTACCCTGGCGGATGATGACAAGAGCAGCTTTATCGCGGGCGATCGCGGCCAGGTCTATTTAACC GGCCTGCGTGACCAGGGCACGGTCCTGGCAACATGGGGACATCAACCTCACCAGCAGTGTCGGGCAGATTTTAGCCTGCC GGAAGGATCGCAATACGGCGGAATCACGGACATCAGCGTCTCGTGTCGCCAGGAGAATTAA Protein sequence : MTVNNTMKPARLAMFIALAFGGSSTSLYASVAFNTELIELDNPGMDKADLSAFESGSQAPGIYHVDIIVDDAFLETGDIQ FTASKADNGDASLQPCLSLAQLKRWGVKTALFPALDAEKSECVNLQAIPQASADFQFAAQRLVLSIPQAAIDLPARGYVP PEMWDEGITAAMLNYSLSGANSRARAGEGVSSNTQYANLRPGVNIGPWRLRNYTTWSRDAAGKDQWDMVYSYLQRAVIPL KAQLTLGDSSAPADVFDSVPFRGVQLASDDDMLPDSLKGYAPVVRGIARTNAQVVIRQNGYQIYQSYVAPGAFEITDMYP TGGAGDLDVTIKEADGSEQHFTLPYASVPVLQREGRLKYALTGGQYRAYNSSVEKTPFGQVSGIYGLRNGITLYGGVQGS GKYQSFAVGTGKNMGDFGALSADVTQAWSTLAHTAKTQGQSLRARYSKNVLNTGTNFSIAGYRYSTRGYYGLQDVLDSYG DSSALQNRRRNRVELTMSQTLGDERGALTLSAAREDYWNTDKSMASWSVGYNNDWNNISYGVTWTYSKNGGPTSSGSGST KTYDHDQLLAFTVSVPLDKFLPQTWANYGLNTSKNNGTTHSIGMNGVALDNSALNWNIQQGYGTDGVGYTGTLNGDYKGT YGEVTAGYGYDKNSERLNYGVQGGILAHADGITLSQPLGETNALIKAPGAHGVNIRNQSGVRTDYRGYTVVNNLSVYRKN DLALDPENLPDDVELEINTRTVTPTRGAVVKADYLSKVGRRVLMTLTTHDQFVPFGAVVTLADDDKSSFIAGDRGQVYLT GLRDQGTVLATWGHQPHQQCRADFSLPEGSQYGGITDISVSCRQEN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| fim2D | AFH78429.1 | putative fimbrial usher protein | Virulence | KpGI-5 | Protein | 5e-143 | 41 |
| sfaF | CAC16953.2 | SfaF protein | Virulence | PAI III 536 | Protein | 2e-148 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| A3UG_09350 | YP_006477307.1 | outer membrane usher protein LpfC | VFG0454 | Protein | 1e-163 | 45 |
| A3UG_09350 | YP_006477307.1 | outer membrane usher protein LpfC | VFG0446 | Protein | 3e-150 | 43 |
| A3UG_09350 | YP_006477307.1 | outer membrane usher protein LpfC | VFG1645 | Protein | 1e-148 | 41 |
| A3UG_09350 | YP_006477307.1 | outer membrane usher protein LpfC | VFG0876 | Protein | 2e-152 | 41 |
| A3UG_09350 | YP_006477307.1 | outer membrane usher protein LpfC | VFG0912 | Protein | 2e-147 | 41 |
