Gene Information

Name : A3UG_07300 (A3UG_07300)
Accession : YP_006476903.1
Strain : Enterobacter cloacae SDM
Genome accession: NC_018079
Putative virulence/resistance : Virulence
Product : general secretion pathway protein E
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1591863 - 1593341 bp
Length : 1479 bp
Strand : +
Note : COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB

DNA sequence :
GTGGATGAACTGACAAAACAGCTGTGTACCAGCGGCTTTGCGAAGGAGAACGGCATCCTTTTCTGGAACGACACGGTCTA
TATCCGTGACGACGTCCCCGCGTTTGCGCTACTGGAGATGCGCCGGGTACTGGGGCGCACCTTTGTGCCCCAGACGCTGA
GCGCGGAAGCGTTTGATGAGATGCTGGCCAAAATCTGGCAGCAGAACAGCGGCGTGTCGCAGCAGCTGGTGGACGATATG
GATGCGGATATCGATCTGATGGCGTTAACCGAGGAGATCCCGGACAACGAAGATCTGCTGGATAACGACGAAAACTCGCC
GGTGATCCGCCTGATTAACGCCATTCTCGGCGAGGCGGTGAAAGACGGCGCATCGGATATCCATATCGAAACCTTTGAGC
GCACGCTGAGCATCCGTTTTCGCGTTGACGGCGTGCTGCGCCCGGTGCTCCAGCCCGCGCGTAAACTGGCTCCGCTGCTG
GTCTCCCGTATTAAGGTGATGTCAAAACTCGACATTGCCGAAAAACGTCTGCCGCAGGATGGCCGTATCTCCCTGCGCAT
TGGCCGCAAGGCGATTGATGTGCGTGTCTCGACCATTCCGTCGCAGTACGGCGAGCGCGTGGTGATGCGTCTGCTCGACA
AGAGCAACCTGAAACCGGATATCAACAAGCTCGGACTCATTGATGAAGAGCTGGAAAAACTGAAAGGGCTGATTAACCGC
CCGCACGGCATCATCCTGGTCACCGGGCCGACAGGCTCCGGTAAAAGTACCACCCTGTATGCCATTCTGTCGGCCCTGAA
CGGACATGAACGCAACATTCTGACCGTCGAAGATCCGATTGAGTACGAACTGGAAGGGGTGGGGCAGACGCAGGTCAACC
CGCGCGTGGACATGACCTTTGCCCGCGGCCTGCGCGCCATTTTGCGTCAGGATCCGGACGTGGTGATGATCGGAGAAATT
CGTGACGGCGAAACCGCGCAAATCGCGGTGCAGGCGTCGCTCACCGGTCACCTGGTCATGTCGACGCTGCACACCAACAG
TGCGGCGGGGGCCATCACCCGTCTGCGGGATATGGGGCTGGAATCCTTTTTGATCGGTTCGTCGCTACTCGGCGTCATTG
CCCAGCGTCTGGTGCGTCGGCTGTGTCCGCACTGCCGTACCACCAGTCCGCTGGATGACAATGAAAAAGCGCTGTTTAGC
TTTATGGATAAGCCACCAAAGGCCATCTATCGCGCCGTCGGCTGCGACCAGTGCCGCCAGAGCGGGTATCAGGGACGCGC
GGGCATTCACGAGTTTCTGGTGGTCGATAGCGCCATGCGTCGGGCCATTCATGAAGATAAAGATGAGATGTCCATTGAGA
CCGAGCTGTTCAGGCAGGCCTACAGCCTGCGCGAAAACGGGCTGATGAAGGTTATCAGCGGCATCACCTCCCTTGAAGAG
GTGATGCGCGTGACCGCCGAGCGTGGGGGCGATGAGTAA

Protein sequence :
MDELTKQLCTSGFAKENGILFWNDTVYIRDDVPAFALLEMRRVLGRTFVPQTLSAEAFDEMLAKIWQQNSGVSQQLVDDM
DADIDLMALTEEIPDNEDLLDNDENSPVIRLINAILGEAVKDGASDIHIETFERTLSIRFRVDGVLRPVLQPARKLAPLL
VSRIKVMSKLDIAEKRLPQDGRISLRIGRKAIDVRVSTIPSQYGERVVMRLLDKSNLKPDINKLGLIDEELEKLKGLINR
PHGIILVTGPTGSGKSTTLYAILSALNGHERNILTVEDPIEYELEGVGQTQVNPRVDMTFARGLRAILRQDPDVVMIGEI
RDGETAQIAVQASLTGHLVMSTLHTNSAAGAITRLRDMGLESFLIGSSLLGVIAQRLVRRLCPHCRTTSPLDDNEKALFS
FMDKPPKAIYRAVGCDQCRQSGYQGRAGIHEFLVVDSAMRRAIHEDKDEMSIETELFRQAYSLRENGLMKVISGITSLEE
VMRVTAERGGDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspE YP_854406.1 type II secretion protein GspE Not tested PAI I APEC-O1 Protein 2e-126 57
gspE CAE85233.1 GspE, hypothetical type II secretion protein Not tested PAI V 536 Protein 1e-126 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A3UG_07300 YP_006476903.1 general secretion pathway protein E VFG0182 Protein 4e-122 57
A3UG_07300 YP_006476903.1 general secretion pathway protein E VFG2048 Protein 2e-127 56
A3UG_07300 YP_006476903.1 general secretion pathway protein E VFG1876 Protein 2e-113 54
A3UG_07300 YP_006476903.1 general secretion pathway protein E VFG0233 Protein 2e-82 48
A3UG_07300 YP_006476903.1 general secretion pathway protein E VFG2426 Protein 1e-67 43