Gene Information

Name : A3UG_05965 (A3UG_05965)
Accession : YP_006476636.1
Strain : Enterobacter cloacae SDM
Genome accession: NC_018079
Putative virulence/resistance : Virulence
Product : ABC-3 protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1302002 - 1302841 bp
Length : 840 bp
Strand : +
Note : COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components

DNA sequence :
ATGATGGCGCTGCTGCTGGAACCCTTCCAGTTTGCGTTTATGCACAACGCGCTGCTGATTTCACTCCTGGTGGCCGTTCC
CTGCGCATTGCTGTCGGTGTTTCTGGTTCTCAAAGGTTGGGCATTAATGGGCGACGCCATGAGCCACGCGGTGTTTCCCG
GTGTTGTACTGGCGTGGATGATGGGTCTGCCGCTGGCGCTGGGGGCATTTGTTGCCGGGCTGTTTTGCGCGGTCGCCACC
GGATACCTGAAGGACAACAGCCGCATCAAGCAGGATACGGTCATGGGGATCGTCTTTTCCGGCATGTTCGGTGCCGGACT
GATCCTCTATATCGCCGTTAAACCTGAGGTGCATCTCGACCATATTCTGTTCGGCGATATGCTGGGCATAAACAACATGG
ATATCCTGCAAAGCGGTATCGTCGCCGGGGTGATTACGCTGGTGATTAGCCTGAAATGGCGCGACTTTTTACTGTTCTGC
TTTGATTATCAGCAGGCGCAGGCGAGCGGTCTGCGCACGCGCTGGCTGCACTACGGGTTACTGTGCATGGTCTCGCTGAC
CATTGTGGCGACGCTGAAAGCGGTGGGGATTATTCTGTCGATTTCTCTGCTGATTGCGCCCGGCGCGATTGCGGTGTTGA
TCACCCGACGCTTCCACATGGCGTTGCTGGTGGCGGTTGCGATCTCGATGCTGGTCTCGGTGAGCGGCATCTTTCTGTCG
TTCTTTCTCGACAGCGCGCCCGCGCCGACCATTGTGGTGCTGTTCGCGCTGGTGTTTATCGTTACCTTTGTGGTGACGGG
CTTGAGGGCCAGGCGGCGGGAGAGCGTGACAGCAATGTGA

Protein sequence :
MMALLLEPFQFAFMHNALLISLLVAVPCALLSVFLVLKGWALMGDAMSHAVFPGVVLAWMMGLPLALGAFVAGLFCAVAT
GYLKDNSRIKQDTVMGIVFSGMFGAGLILYIAVKPEVHLDHILFGDMLGINNMDILQSGIVAGVITLVISLKWRDFLLFC
FDYQQAQASGLRTRWLHYGLLCMVSLTIVATLKAVGIILSISLLIAPGAIAVLITRRFHMALLVAVAISMLVSVSGIFLS
FFLDSAPAPTIVVLFALVFIVTFVVTGLRARRRESVTAM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 6e-93 71
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-92 71
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 2e-92 71
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 2e-92 71
sitD NP_461785.1 permease Virulence SPI-1 Protein 8e-93 71
sitC NP_461784.1 permease Virulence SPI-1 Protein 2e-45 41
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 2e-45 41
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 2e-45 41
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 1e-45 41
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-45 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A3UG_05965 YP_006476636.1 ABC-3 protein BAC0352 Protein 4e-93 71
A3UG_05965 YP_006476636.1 ABC-3 protein BAC0442 Protein 6e-69 52
A3UG_05965 YP_006476636.1 ABC-3 protein BAC0351 Protein 9e-46 41
A3UG_05965 YP_006476636.1 ABC-3 protein BAC0441 Protein 1e-41 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A3UG_05965 YP_006476636.1 ABC-3 protein VFG0528 Protein 4e-93 71
A3UG_05965 YP_006476636.1 ABC-3 protein VFG0527 Protein 8e-46 41