Gene Information

Name : A3UG_05960 (A3UG_05960)
Accession : YP_006476635.1
Strain : Enterobacter cloacae SDM
Genome accession: NC_018079
Putative virulence/resistance : Virulence
Product : ABC-3 protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1301148 - 1302005 bp
Length : 858 bp
Strand : +
Note : COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components

DNA sequence : 
ATGAACGCGCTTCTTGAACCCTTCGGCTATGAGTACATGCTCAACGCGATGTGGGTCTCGGCGATGGTGGGCGGGCTGTG
CGCCTTTCTCTCCTGTTACCTGATGCTCAAAGGCTGGTCGCTGATTGGCGATGCGCTCTCGCACTCTATCGTACCGGGCG
TGGCGGGCGCTTATATGCTCGGCCTGCCGTTCTCGCTGGGGGCGTTTTTATCGGGTGGGCTGGCGGCGGGGAGCATGCTT
TTTCTGAACCAGCGCAGCCGCCTGAAAGAGGACGCTATTATCGGACTGATATTTTCCTCCTTTTTCGGTCTGGGTCTGTT
TATGGTGTCGCTCAACCCAACCTCGGTAAATATTCAGACTATCGTCCTCGGTAATATCCTCGCGATTGCTCCGGAAGATA
TTGTCCAGCTGGCGATTATCGGCGTGGTGTCAATGCTCATTCTGTTGTTCAAATGGAAAGATCTGATGGTGACCTTTTTT
GATGAGAACCACGCCCGCGCCATTGGCCTGCGTCCTGAACGCCTGAAAATCCTCTTCTTTACCCTGCTGGCGGTCTCTAC
CGTGGCGGCGCTGCAAACCGTCGGCGCGTTTCTGGTGATCTGTCTGGTGGTCACCCCCGGTGCGACCGCGTGGCTGCTGA
CCGACCGCTTTCCGCGCCTGCTGATGATTGCGGTCGCCATTGGCAGCATCACCAGCTTCCTTGGCGCGTGGGCCAGCTAC
TATCTGGACGGCGCGACCGGCGGCATTATCGTGGTCGCCCAGACGCTGCTGTTCCTGCTGGCATTCGTCTTTGCACCGAA
GCATGGCCTGCTTGCCAGCCGGCGCCGGGCACGTCACGCGCAGGAGGTACTTCCATGA

Protein sequence : 
MNALLEPFGYEYMLNAMWVSAMVGGLCAFLSCYLMLKGWSLIGDALSHSIVPGVAGAYMLGLPFSLGAFLSGGLAAGSML
FLNQRSRLKEDAIIGLIFSSFFGLGLFMVSLNPTSVNIQTIVLGNILAIAPEDIVQLAIIGVVSMLILLFKWKDLMVTFF
DENHARAIGLRPERLKILFFTLLAVSTVAALQTVGAFLVICLVVTPGATAWLLTDRFPRLLMIAVAIGSITSFLGAWASY
YLDGATGGIIVVAQTLLFLLAFVFAPKHGLLASRRRARHAQEVLP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 2e-90 89
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 2e-90 89
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-90 89
sitC NP_461784.1 permease Virulence SPI-1 Protein 2e-90 89
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 2e-90 89
sitD NP_461785.1 permease Virulence SPI-1 Protein 5e-36 42
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 4e-36 42
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 9e-36 42
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 9e-36 42
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 8e-36 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A3UG_05960 YP_006476635.1 ABC-3 protein BAC0351 Protein 1e-90 89
A3UG_05960 YP_006476635.1 ABC-3 protein BAC0441 Protein 4e-67 68
A3UG_05960 YP_006476635.1 ABC-3 protein BAC0352 Protein 2e-36 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A3UG_05960 YP_006476635.1 ABC-3 protein VFG0527 Protein 1e-90 89
A3UG_05960 YP_006476635.1 ABC-3 protein VFG0528 Protein 2e-36 42