Gene Information

Name : A3UG_05950 (A3UG_05950)
Accession : YP_006476633.1
Strain : Enterobacter cloacae SDM
Genome accession: NC_018079
Putative virulence/resistance : Virulence
Product : periplasmic solute binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1299431 - 1300342 bp
Length : 912 bp
Strand : +
Note : COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin

DNA sequence : 
ATGCACCTACGGCAAGGATTGAAGCGTCTGTTGTTCAGCGCACTGCTCATAACCGGCACCTCTACGGGCGCGCTGGCGGC
TGAAAAGTTCCAGGTCATAACCACCTTTACCGTTATCGCTGATATGGCGAAAAACGTGGCGGGAGACGCCGCAGAAGTGA
CATCGATTACCAAACCGGGCGCTGAAATCCATGAGTATCAGCCCACGCCGGGCGATATCAAACGCGCGCAAAAAGCACAG
TTGATTCTGGCGAATGGCATTAATCTCGAACTCTGGTTTCAGCGCTTTTATCAGCATCTGAACGGCGTGCCGGAAGCGAT
CGTCACCAAAGGCATCACGCCGATGGGGATCGGTGAAGGGCCGTACAACGGCAAGCCCAACCCGCACGCGTGGATGTCGC
CGGACAACGCGCTGATTTACGTCGACAACATTCGCGATGCGCTGGTGAAGTACGACCCGGCGAATGCGCAGACCTATCAG
CGAAATGCCGAAGCCTACAAGCAGAAGATCACCGCTACCCTCGAACCGCTGCGTAAGCAGGTGGCGGAGATCCCGGAAGA
CAAACGCTGGATGGTGACCAGCGAAGGGGCCTTCTCCTATCTGGCGCGCGATCTTGGCCTGAAAGAGCTTTATCTCTGGC
CGATCAATGCCGATCAGCAGGGCACGCCTCAGCAGGTGCGCAAGGTGATCGACCTGGTGAAAAAACATCATATCCCGGCG
GTATTCAGCGAAAGCACCGTTTCCGATAAGCCCGCGCGTCAGGTGGCGCGCGAAACCGACACCCATTACGGCGGCGTACT
GTACGTTGACTCCCTGAGCGCGGAAAACGGCCCGGTGCCGACCTATATCGATCTGCTGAACGTCACCACCCGCACGCTGG
TGCAGGGCATCCGTGACGGCATGAAGGAGTAA

Protein sequence : 
MHLRQGLKRLLFSALLITGTSTGALAAEKFQVITTFTVIADMAKNVAGDAAEVTSITKPGAEIHEYQPTPGDIKRAQKAQ
LILANGINLELWFQRFYQHLNGVPEAIVTKGITPMGIGEGPYNGKPNPHAWMSPDNALIYVDNIRDALVKYDPANAQTYQ
RNAEAYKQKITATLEPLRKQVAEIPEDKRWMVTSEGAFSYLARDLGLKELYLWPINADQQGTPQQVRKVIDLVKKHHIPA
VFSESTVSDKPARQVARETDTHYGGVLYVDSLSAENGPVPTYIDLLNVTTRTLVQGIRDGMKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 4e-110 77
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 4e-110 77
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 4e-110 77
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 4e-110 77
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 3e-110 77

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A3UG_05950 YP_006476633.1 periplasmic solute binding protein BAC0349 Protein 2e-110 77
A3UG_05950 YP_006476633.1 periplasmic solute binding protein BAC0439 Protein 7e-90 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A3UG_05950 YP_006476633.1 periplasmic solute binding protein VFG0525 Protein 2e-110 77