Gene Information

Name : nrdE (SCIM_0589)
Accession : YP_006469491.1
Strain : Streptococcus intermedius JTH08
Genome accession: NC_018073
Putative virulence/resistance : Unknown
Product : ribonucleoside-diphosphate reductase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 681760 - 683919 bp
Length : 2160 bp
Strand : -
Note : -

DNA sequence :
ATGGGACTCAAACAATTAGAAGATGTGACGTATTTCCGTCTCAACAATGAAATCAACCGTCCAATCAATGGACAAATTAT
GCTCCACAAAGATAAAGAAGCTCTGGAGGCATTCTTTAAGGAAAATGTTGAACCAAATACAAAAAAATTCTCTTCTATTA
CTGAAAAAATTAACTATTTAATTCAAGAAAACTATTTAGAAAAAGAATTCATCCAGCTTTATTCGTCTGAATATATTGAA
GAATTAGCTGCTTTCATTCATGCACAAGATTTCCATTTTAAATCTTTTATGGCAGCTTATAAATTCTACAATCAATATGC
TCTTAAAACAAATGACGGTGAATATTATCTAGAAAGCATGGAAGATCGTGTTCTATTTAACGCGCTCTATTTTGCCAACG
GTAATGAAGCAATCGCTAAGGATATCGCTAATGAAATCATTCACCAGCGCTATCAACCGGCTACACCAAGCTTCCTCAAT
GCAGGACGTTCCCGTCGCGGTGAACTAGTTTCTTGCTTCCTCATCCAAGTAACAGATGATATGAACTCTATCGGTCGCTC
CATTAACTCTGCTCTGCAATTATCTCGTATCGGTGGTGGCGTTGGGATCTCTCTCAGTAACCTGCGTGAAGCAGGCGCTC
CCATCAAAGGGTACGAAGGGGCTGCTTCTGGTGTTGTACCAGTGATGAAACTGTTTGAGGACAGCTTCTCTTACTCTAAC
CAGCTGGGACAACGTCAGGGAGCCGGGGTTGTTTACCTCAATGTCTTCCACCCAGATATCATCGCTTTCCTTTCTACGAA
GAAAGAAAATGCTGACGAAAAAGTTCGGGTTAAAACTCTTTCTTTAGGAGTTGTCATTCCAGATAAATTTTACGAATTAG
CTCGTAAGAATGAGGAAATGTACCTCTTCAGTCCTTATTCTATTGAACGCGAGTACGGTGTCCCATTTGCTTATATTGAT
ATTACTGAAAAATATGACGAATTGGTTGCCAACCCTAAGATTAATAAAACGAAAATTAAAGCTCGTGATTTAGAAACAGA
AATTTCTAAACTCCAACAAGAATCTGGCTATCCTTATGTCGTAAATATCGATACAGCTAACCGTTCAAATCCAATCGACG
GTAAAATCATCATGAGTAATCTCTGCTCTGAAATCCTGCAAGTACAAGAACCAAGTCTCCTGAATGATGCTCAAGAATTT
GTACATTTGGGAACGGATGTTTCTTGCAATCTTGGGTCGACCAATGTAGTCAACATGATGACTTCCCCTGACTTTGGAAA
ATCTATCCGCACTATGACACGCGCTTTGACCTTTGTCACAGATAGCTCTCACATCAAAGCTGTTCCAACCATTGACTACG
GCAATAGCTTAGCTCATACTTTTGGGCTAGGAGCCATGGGCTTACACAGTTATCTGGCTCAACAGTTGATTGAATATGGT
TCAGCTGAATCAGTTGAGTTTACCAGCATTTACTTTATGCTCATGAATTATTGGACTCTTGTTGAATCCAACAATATTGC
TCGTGAGCGCGGCATGACTTTCCACAACTTTGAAAAATCTGATTATGCTAACGGTACTTACTTTGACAAATACCTGACGG
GTGAATTTGTACCTCAGTCTGATCGTATCAAAGAACTCTTCACAGATATCTTTATCCCATCTGCAGAAGACTGGGCAGAG
TTACGCGATAAGGTCAAGGCTGACGGTCTCTATCATCAAAACCGCCTAGCCGTTGCACCAAATGGTTCTATCAGCTATAT
CAATGATGTCTCTGCTTCTATCCACCCCATTACCCAACGGATCGAAGAACGTCAAGAAAAGAAAATCGGTAAGATCTACT
ATCCTGCTGCTGGTCTGTCAACTGAGACTATTCCTTACTACACTAGCGCTTATGACATGGACATGCGCAAGGTGATTGAT
GTCTATGCAGCGGCAACTGAGCATGTAGACCAAGGCCTTTCCCTGACTCTCTTTATGCGCAGCGATATTCCTAAAGGCCT
CTATGAGTGGAAAAAAGAAAGCAAGCAAACAACTCGCGACCTTTCTATCCTGCGTAACTACGCCTTCAACAAGGGTATCA
AGTCCATCTACTACGTCCGTACCTTCACTGATGATGGCGGCGAAGTTGGGGCTAACCAATGTGAAAGCTGTGTGATCTAA

Protein sequence :
MGLKQLEDVTYFRLNNEINRPINGQIMLHKDKEALEAFFKENVEPNTKKFSSITEKINYLIQENYLEKEFIQLYSSEYIE
ELAAFIHAQDFHFKSFMAAYKFYNQYALKTNDGEYYLESMEDRVLFNALYFANGNEAIAKDIANEIIHQRYQPATPSFLN
AGRSRRGELVSCFLIQVTDDMNSIGRSINSALQLSRIGGGVGISLSNLREAGAPIKGYEGAASGVVPVMKLFEDSFSYSN
QLGQRQGAGVVYLNVFHPDIIAFLSTKKENADEKVRVKTLSLGVVIPDKFYELARKNEEMYLFSPYSIEREYGVPFAYID
ITEKYDELVANPKINKTKIKARDLETEISKLQQESGYPYVVNIDTANRSNPIDGKIIMSNLCSEILQVQEPSLLNDAQEF
VHLGTDVSCNLGSTNVVNMMTSPDFGKSIRTMTRALTFVTDSSHIKAVPTIDYGNSLAHTFGLGAMGLHSYLAQQLIEYG
SAESVEFTSIYFMLMNYWTLVESNNIARERGMTFHNFEKSDYANGTYFDKYLTGEFVPQSDRIKELFTDIFIPSAEDWAE
LRDKVKADGLYHQNRLAVAPNGSISYINDVSASIHPITQRIEERQEKKIGKIYYPAAGLSTETIPYYTSAYDMDMRKVID
VYAAATEHVDQGLSLTLFMRSDIPKGLYEWKKESKQTTRDLSILRNYAFNKGIKSIYYVRTFTDDGGEVGANQCESCVI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1481 YP_001800875.1 ribonucleotide-diphosphate reductase subunit alpha Not tested Not named Protein 3e-178 52