Gene Information

Name : SCIM_0547 (SCIM_0547)
Accession : YP_006469449.1
Strain : Streptococcus intermedius JTH08
Genome accession: NC_018073
Putative virulence/resistance : Resistance
Product : two-component system transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 626470 - 627126 bp
Length : 657 bp
Strand : +
Note : CheY domain and HTH-like DNA-binding domain

DNA sequence :
ATGCATAAGATTTTAGTAGTAGAAGATGACACTACCATCAATCAAGTGATTTGTGAATTTTTAAAAGAAAACCATTATGA
AGTGACAGCCGTTTTTGACGGTGCAGAAGCTTTGCGTATATTTGAAGAAAAATCATTTGACTTAATCGTTTTGGACGTTA
TGTTACCTTCCATGAGTGGTTTGGATGTGCTAAAGGAAATCCGAAAAACATCACAGGTACCAGTTATGATGTTAACTGCA
CTAGATGATGAATATACTCAACTGGTCAGCTTTAATCATTTGATTAGTGACTACGTCACCAAGCCATTTTCACCATTGAT
TTTGATGAAACGGATTGAGAATATTTTCCGTAGTACAGTAACAGAATCTGAAATTATTGTTGGGGATTTGCGTGTTTCAG
TTGATGATTGCACGGTTTATTGGCAAGAAGAAAAAATGTCTCCAACCAAAAAAGAATATGAAATTATCCAAGCTCTGGCT
AAAAGAAAAAATCATTTAGTGACACGAGATCAATTGATGAATACAATCTGGGGTTATAGCGAACTAGATAGTCGTGTTTT
AGATAATCATGTAAAAAATATTCGAAAAAAAATCCCTGGAATTCCTCTTAAAACAATTACTGGTATGGGGTACCAACTTG
GGGGAGAAGAAGAGTGA

Protein sequence :
MHKILVVEDDTTINQVICEFLKENHYEVTAVFDGAEALRIFEEKSFDLIVLDVMLPSMSGLDVLKEIRKTSQVPVMMLTA
LDDEYTQLVSFNHLISDYVTKPFSPLILMKRIENIFRSTVTESEIIVGDLRVSVDDCTVYWQEEKMSPTKKEYEIIQALA
KRKNHLVTRDQLMNTIWGYSELDSRVLDNHVKNIRKKIPGIPLKTITGMGYQLGGEEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanRB YP_008394254.1 DNA-binding response regulator VanRB Not tested Not named Protein 2e-36 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SCIM_0547 YP_006469449.1 two-component system transcriptional regulator AF310956.2.orf0.gene Protein 6e-37 41