Gene Information

Name : dps (SCIM_0402)
Accession : YP_006469304.1
Strain : Streptococcus intermedius JTH08
Genome accession: NC_018073
Putative virulence/resistance : Resistance
Product : DNA protection system DNA-binding ferritin-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 457827 - 458354 bp
Length : 528 bp
Strand : +
Note : oxidative damage protectant

DNA sequence :
ATGATTGATGTAAAAAACGATGCAGCTAAAGATGTTGCAACTTTCTCAAATGTTGAGTCTTTGAATAAGTCTCTTCCAAA
AACAAAAGCAGTATTGAATCAAGCAGTAGCAGATTTATACACTGCTCGTATTGCTCTTCACCAAGTACATTGGTATATGC
GTGGAGCAGGTTTCATGGTTTGGCATCCTAAGATGGATGAATATATGGAAAACTTGGATACAACATTGGATGAAGTGAGT
GAACGTTTGATTACTCTAGGCGGAACTCCATATTCAACGTTGAGTGAATTTATTCAACACAGTAATATTGAAGAAAAAGA
AGGAAAATTCAGTAAGAGTGTAGAAGAAAGTTTGGAACGTGTTATCGAAATTTTCCGTTACTTGGTGAAGCTTTACCAAG
AAGCTTTGGATGCAACAGATGAAGAAGGAGACGATGTTACGAACGATATTTTTGTTGGTGCCAAAGCCGATTTGGAAAAG
AACATTTGGATGTTGACAGCAGAAATTGGACAAGTTCCAGGATTGTAA

Protein sequence :
MIDVKNDAAKDVATFSNVESLNKSLPKTKAVLNQAVADLYTARIALHQVHWYMRGAGFMVWHPKMDEYMENLDTTLDEVS
ERLITLGGTPYSTLSEFIQHSNIEEKEGKFSKSVEESLERVIEIFRYLVKLYQEALDATDEEGDDVTNDIFVGAKADLEK
NIWMLTAEIGQVPGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0606 NP_814364.1 Dps family protein Not tested Not named Protein 1e-36 49
ef0119 AAM75320.1 EF0119 Not tested Not named Protein 7e-37 49

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
dps YP_006469304.1 DNA protection system DNA-binding ferritin-like protein BAC0134 Protein 6e-48 60