Gene Information

Name : SCIM_0258 (SCIM_0258)
Accession : YP_006469160.1
Strain : Streptococcus intermedius JTH08
Genome accession: NC_018073
Putative virulence/resistance : Unknown
Product : single-strand binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 300133 - 300603 bp
Length : 471 bp
Strand : +
Note : -

DNA sequence :
ATGATAAATAACGTTGTACTTGTGGGTCGGATGACCCGAGATGCCGAACTTCGCTATACGCCGCAAAATCAAGCGGTCGC
AACTTTTACTCTTGCTGTTAATCGCAACTTTAAAAATCAAAGTGGCGAGAGAGAAGCAGATTTTATTAACGTTGTAATTT
GGCGCCAACAGGCAGAAAATCTTGCAAATTGGGCTAAAAAAGGAGCTCTTATCGGAGTTACTGGTCGCATTCAGACACGT
AACTACGAAAATCAGCAAGGTCAACGTGTCTATGTGACAGAAGTCGTAGCGGATAATTTTCAGTTATTGGAAAGTCGCGC
TAGTCGTGAAGGTCAATCTTCTGGCGGCTATACTTCTAACAATTTTGGAAGTTCACCTTCTGCCAACCAAGTACCCAACT
TTTCTCGTGATGAAAATCCATTTGGGAATACCAATCCAATGGACATCTCAGATGACGATCTACCATTTTAA

Protein sequence :
MINNVVLVGRMTRDAELRYTPQNQAVATFTLAVNRNFKNQSGEREADFINVVIWRQQAENLANWAKKGALIGVTGRIQTR
NYENQQGQRVYVTEVVADNFQLLESRASREGQSSGGYTSNNFGSSPSANQVPNFSRDENPFGNTNPMDISDDDLPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SEQ_0802 YP_002746140.1 single-strand binding protein Not tested ¥ÕSeq2 Protein 2e-42 68
ssb-2 NP_814280.1 single-strand binding protein Not tested Not named Protein 4e-39 59
ef0020 AAM75226.1 EF0020 Not tested Not named Protein 3e-39 59
SH1792 YP_253707.1 single strand DNA binding protein Not tested ¥ÕSh1 Protein 5e-29 52
SAKOR_01963 YP_008492151.1 Single-strand DNA binding protein Not tested ¥ÕSa3 Protein 9e-33 52
MW1921 NP_646738.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 3e-32 51
SAV1983 NP_372507.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 2e-32 51
SA1792 NP_375091.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 2e-32 51
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 1e-32 51
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 1e-32 51