Gene Information

Name : SCIM_0233 (SCIM_0233)
Accession : YP_006469135.1
Strain : Streptococcus intermedius JTH08
Genome accession: NC_018073
Putative virulence/resistance : Unknown
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 271170 - 272078 bp
Length : 909 bp
Strand : -
Note : -

DNA sequence :
ATGGAAACTATTTTGAATGTGAAACACATCAGTAAGAGATTTGGTCAACAGCTGGCTCTAGATGATGTTAGTCTTACTGT
GAAACAAGGAGAAATTTACGGTCTAATTGGGAAAAATGGAGCTGGTAAGACAACACTCATCAAAGTGATTACCCAGCTGA
TTCAGCCAAATAGTGGTACGATTGCTCTCTTTGGTTCTTCCACCAAATCTGAATGGACACATGCACTCAAGCGAGTCGGT
TCTGTCATTGAATCTCCAGCGGCTTATGCCCACCTGACCGCTTATGAAAATTTAAACTATTGCTGCAAAATACGACATAT
TCCCAATGCAAATAAGGTTATTCAAGAAACTCTCTCTTATGTCGGCCTAACCAATACTGGTAAGAAAAAGTTTCGAGATT
TTTCTCTTGGAATGAAACAGCGCTTAGGTATCGCTATTGCACTTCTATCAAAACCAGATTTGATGATTTTAGATGAACCA
ATCAACGGACTTGATCCTGTCGGAATCAAAGAATTCCGACAACTAGTGCAGCAGCTCAATGACGAATTGGATATGACTTT
CATTATCTCTAGCCATATTTTAAGTGAACTTTATTTAGTTGCTACAAAATTCGGAATCATCGAAAATGGGAAACTCATCA
AAGAAATTACTAAAGCAGAGTTTGAAGAAGAAAGTGAAGATTATATTGTTTTGAAAACAAATAATCTCGCCAAGGCAAGC
AACATACTCCACGATCATCTGGGCTACCGTCTGAAAGTCGTGAATGCAACAGATGAGATACACATTTTTACTCATTCGCA
TGAGATTAACACTATCATTCAAGAATTAGGAAAGATGAATATTGCTATCAACGAAATCTACTATGCGCGCCAAGACTTAG
AAAAATACTTTACAGATTTGGTAAAATAG

Protein sequence :
METILNVKHISKRFGQQLALDDVSLTVKQGEIYGLIGKNGAGKTTLIKVITQLIQPNSGTIALFGSSTKSEWTHALKRVG
SVIESPAAYAHLTAYENLNYCCKIRHIPNANKVIQETLSYVGLTNTGKKKFRDFSLGMKQRLGIAIALLSKPDLMILDEP
INGLDPVGIKEFRQLVQQLNDELDMTFIISSHILSELYLVATKFGIIENGKLIKEITKAEFEEESEDYIVLKTNNLAKAS
NILHDHLGYRLKVVNATDEIHIFTHSHEINTIIQELGKMNIAINEIYYARQDLEKYFTDLVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cdd4 CAA63569.1 - Not tested PaLoc Protein 2e-40 42
SSU98_0954 YP_001200512.1 hypothetical protein Not tested 89K Protein 6e-34 42
SSU05_0946 YP_001198312.1 hypothetical protein Not tested 89K Protein 6e-34 42