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Name : SCIM_1578 (SCIM_1578) Accession : YP_006470478.1 Strain : Streptococcus intermedius JTH08 Genome accession: NC_018073 Putative virulence/resistance : Virulence Product : protein Cps9E Function : - COG functional category : - COG ID : - EC number : - Position : 1789575 - 1791383 bp Length : 1809 bp Strand : - Note : - DNA sequence : ATGGAATTAACGAGAGCACAAAAACGAGTTATCTTGATGATAGTGGATGCCGCTTTACTATATATAAGTGGTTATATAGC TTATTTTTTCTTGTCTGAGTATATAGAGACATCAAATGATATGCTGTTTAAAACACTCTCTTCCATTGTCGTAATTTACC TTCTTTTAGGTTTAATCACACGTGTATTTTCAATTATTAATCGTTACACAGATTATAAGACGTTAAGTAAAATTTCTCTT ATTCTACTGGGAACTTATCTCATTACAGCTCTAGTGGAATTGTTTTTATCCATAATCATTAGTTATCGTTTTCTTTTGCT TAGTTGCATGTTTTCTATTCTATTTACGATATCAATCAGATTAGCTTGGAGAATGTGGCATAGCTTAAAGAATGGAGTGA ATTACGAAGAAGTTACAAATTTAAATGTTCGTAGGACATTAGTGGTCGGCGCGGGAGACGGAGGAAATCTTTTTATTACG ACTGCGCTAAAAGACTCGCCAGATTTGAAAATCGTTGCGATTGTCGATAAAGATGTAAAAAAACAAGGTTCTTTTTTACA TGGTGTTAAAGTTGTTGGATCTGATGAACAAATCCCAGAAATTGTAGCAAACTATGAAATTAACCAAATTGTTATTGCGA TCCCCTCTTTGAAACCAGAGGAATATGAACATCTTTTAGAACTTTGCAAAAAAACAGCTGCTAAAGTTAGCACTATTCCT AAATATGAAGAAGTTGTTACAGGGAAACTGAGTGTCAGTAAACTACGAGAGATTGATATTGCTGATTTATTAGGGCGCAA AGAAGTAAAACTGGATCAAACAAGTTTAAATTCAAATCTCAAAGGCAAGACCGTATTAGTGACAGGAGCTGGAGGTTCTA TCGGCTCAGAATTATGTCGGCAAATTGCTCGCTTCTTTCCTAAAAGGCTGTTACTTTTAGGGCATGGCGAAAATTCTATT TATGTGATACATAAAGAGCTGCTTGCACAATACAAGGACACCATTGAGATTGTTCCAATCATTGCAGATATTCAAGATAG AGAGCGAATTTTTAAACTGATGGAGACTTATCATCCAGATCGTGTTTATCATGCTGCCGCTCATAAACACGTTCCTTTGA TGGAGTATAATCCAACTGAAGCAGTCAAGAACAACATATATGGCACAAAAAATGTAGCGGAAGCTGCTAAAGCAGCTGGA GTTGCTAAGTTTGTTATGATTTCGACAGATAAAGCAGTCAATCCTCCAAATGTTATGGGAGCCACTAAGCGAGTTGCTGA AATGATTGTAACAAGTCTGAATGAAGAAGGAAAAACTCTTTTTGCTGCTGTTCGATTCGGTAATGTTTTGGGGAGCCGTG GTAGTGTTGTTCCACTATTTAAAGAACAAATTGCCAAAGGTGGCCCTATCACAGTAACTGATTTTCGTATGACACGTTAC TTTATGACAATACCAGAAGCTAGTCGTTTGGTTATTCAAGCAGGAGCTCTTATGCATGGGGGAGAGATTTTTGTATTAGA TATGGGAGAACCTGTTAAGATTTTGAACTTAGCTAAAAAAATGATAACTCTAAGTGGTCACACTGAAAATGAAATTAAGA TTGTTGAAAGTGGTATTCGCCCTGGTGAAAAATTGTATGAAGTATTACTGTCTTCAGAAGAACGCAAAGCAGAGCAAATC TATGAAAAAATATTTGTTGGAAATGTTCATGCTTTGTCAAAAGAAGAAGTGGACGCTTTTATCTGCTCGATTTCCAATCT TGATGGACAAGAGCTGAAAGAAAAATTGGTGCAATTTGCACAGCAGTAA Protein sequence : MELTRAQKRVILMIVDAALLYISGYIAYFFLSEYIETSNDMLFKTLSSIVVIYLLLGLITRVFSIINRYTDYKTLSKISL ILLGTYLITALVELFLSIIISYRFLLLSCMFSILFTISIRLAWRMWHSLKNGVNYEEVTNLNVRRTLVVGAGDGGNLFIT TALKDSPDLKIVAIVDKDVKKQGSFLHGVKVVGSDEQIPEIVANYEINQIVIAIPSLKPEEYEHLLELCKKTAAKVSTIP KYEEVVTGKLSVSKLREIDIADLLGRKEVKLDQTSLNSNLKGKTVLVTGAGGSIGSELCRQIARFFPKRLLLLGHGENSI YVIHKELLAQYKDTIEIVPIIADIQDRERIFKLMETYHPDRVYHAAAHKHVPLMEYNPTEAVKNNIYGTKNVAEAAKAAG VAKFVMISTDKAVNPPNVMGATKRVAEMIVTSLNEEGKTLFAAVRFGNVLGSRGSVVPLFKEQIAKGGPITVTDFRMTRY FMTIPEASRLVIQAGALMHGGEIFVLDMGEPVKILNLAKKMITLSGHTENEIKIVESGIRPGEKLYEVLLSSEERKAEQI YEKIFVGNVHALSKEEVDAFICSISNLDGQELKEKLVQFAQQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 1e-105 | 53 |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 6e-110 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SCIM_1578 | YP_006470478.1 | protein Cps9E | VFG1300 | Protein | 2e-112 | 48 |
