Gene Information

Name : SCIM_1577 (SCIM_1577)
Accession : YP_006470477.1
Strain : Streptococcus intermedius JTH08
Genome accession: NC_018073
Putative virulence/resistance : Virulence
Product : galactosyltransferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1788957 - 1789556 bp
Length : 600 bp
Strand : -
Note : -

DNA sequence : 
ATGTATAAAACGATTAAACGATTCTTAGATATTATTTTATCATTTTGTGGGATGCTTATTTTATCTCCAGTATTTCTTAT
TTTGATTGTGGCAATAAAGTTAGATTCTAAAGGCCCGGTATTGTTTAAACAAAAGCGGGTAGGGTTGCATAAACAATATT
TTTATATTTTAAAATTCAGAACTATGCGCATTGATACCCCTAAAGATACTCCTACACATTTATTGGCAAATCCTGAGCAA
TGGATAACAAAAATTGGAAAAATTTTGCGTAAAACATCACTCGATGAGCTACCACAAATTTGGAATATTTTTGTTGGAGA
TATGAGCATTATTGGACCCCGACCAGCGCTTTGGAATCAGTATGATTTGATTGAAGAACGTGATAAGTATGGGGCCAATG
ATATATTACCTGGATTAACAGGTTGGGCACAAATTAATGGTCGAGATGAATTACCAATCTATGAGAAAGCATCTTTAGAT
GGTTATTATGTCAAACATATGTCGTTTCTACTGGATCTTCACTGTTTTTTTGGAACCATTAAAAGCGTTGTTAAAAGTGA
AGGAGTAGTTGAAGGTGGAACAGGAAAAAAGAGAGAATAA

Protein sequence : 
MYKTIKRFLDIILSFCGMLILSPVFLILIVAIKLDSKGPVLFKQKRVGLHKQYFYILKFRTMRIDTPKDTPTHLLANPEQ
WITKIGKILRKTSLDELPQIWNIFVGDMSIIGPRPALWNQYDLIEERDKYGANDILPGLTGWAQINGRDELPIYEKASLD
GYYVKHMSFLLDLHCFFGTIKSVVKSEGVVEGGTGKKRE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 3e-35 48
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 3e-35 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SCIM_1577 YP_006470477.1 galactosyltransferase VFG1369 Protein 3e-52 68
SCIM_1577 YP_006470477.1 galactosyltransferase VFG1309 Protein 2e-39 49