Gene Information

Name : polA (SCIM_1562)
Accession : YP_006470462.1
Strain : Streptococcus intermedius JTH08
Genome accession: NC_018073
Putative virulence/resistance : Unknown
Product : DNA polymerase I
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1770044 - 1772689 bp
Length : 2646 bp
Strand : -
Note : -

DNA sequence :
ATGGAAAAAAAGAACAAGTTATTATTAATAGACGGCTCTTCTGTAGCTTATCGTGCTTTTTTTGCACTGTACAATCAAAT
TGATCGTTTCAAGAGTCCATCGGGCTTGCATACCAATGCTATTTACGGTTTCCACCTCATGATCAATCATCTCTTGGAGC
GCGTGCAGCCGACTCATATCTTGGTGGCATTTGATGCGGGGAAGACCACCTTTCGGACAGAGATGTATGCTGATTACAAA
GGTGGTCGAGCTAAGACTCCGGAGGAATTTCGCGAGCAGCTGCCCTTTATTCGAGAAATGCTGCAGCACTTGGGCATTCA
CTATTATGATTTGGCTCAGTACGAGGCAGATGACATCATCGGGACTTTAGACAAGATGGCTGAAAAGACAGCTGTCCCTT
ACGATGTGACCATTGTCAGTGGTGATAAGGATCTGATTCAGCTAACGGATGATAATACTGTGGTGGAGATTTCCAAGAAA
GGTGTGGCTGAGTTCGAAGAATTCACTCCAGCCTACCTGATGGAAAAGATGGGAATTAGTCCTGTTCAATTTATTGACCT
CAAGGCTTTAATGGGTGATAAATCAGATAATATTCCCGGTGTGACTAAAATCGGAGAGAAAACGGGGCTCAAGCTTCTTT
TAGAATATGGATCGCTGGAAGGTATTTATGATCATATTGACCAACTGAAACAGTCTAAGATGAAGGAAAATCTCATTAAG
GATAAGGAAATAGCTTTCTTGTCTAGAAAGCTTGTCACTATTGACACTCAAGCACCCATTGAAATCGGTTTAGAAGATAT
TCTCTATCAAGGATCAGATATTAAACAACTAGGTAGATTCTATGATGAAATGGGCTTTAAACAATTTAAGCAAGCGCTAG
AATCAGAAGTAGAGCCAGAAGAAATGGCTGATATTGCTTTTGAGGAAGTGATGGAAGTCCGACCAGAGATGCTTAGTGCA
GACGATTTTTTCTATTTTGAGATGTTAGGGGATAACTACCATATAGACGAGATGGTTGGGTTTGCTTGGGGAAATGCCCA
GAAGATTTATGTTAGTCAAGATGTTCGTCTTTTGCAGCAACCAATTTTCAAAGAATTTTTAGAAAATACAGCCTTGAAGG
TTTACGATTTGAAGCGCTCTAAAGTCTTACTCAGTCGCTTAGGAATTGAACTTTCACAACTGGCGTTTGACAGTCGTTTA
GCTAAGTATCTTCTTTCAACTGTTGACAACAATGAAATTGCAACGATTGCTAGCCTTTATGGCAAGACCAAACTTGATGA
AGATGAGGTGATTTATGGAAAAGGAGCTAAGCGGGCACTGCCTGAAAAGCCTATTTTATTGAATCATTTAGCTAGAAAAG
TCGCGGTTCTTGTTGAAACGGAACAACCTATGATAGATTTGCTGCGTCAGCACGATCAGCTTAATCTCCTGTACGAAATG
GAGCAACCTTTAGCACTTGTACTTGCTAAAATGGAGATTGCTGGTATTAAGGTAGAGCGAGAAACATTGCAAACGATGCA
GGTTGAAAACGAGAGAGTTCTGACTCAGTTAACACAGGAAATCTATGATTTAGCAGGGGAAGAATTCAATATCAATTCGC
CTAAACAATTGGGAGGTATTCTTTTTGAAAAATTAGGGCTGCCAACGGCTTTTACTAAAAAAACGAAAACGGGCTATTCT
ACTGCGGTAGATGTATTAGAACGTTTAGCGCCGATTGCACCGATTGTTGAAAAGATTTTGGAGTATCGACAAATTGCTAA
AATTCAGTCAACTTATGTCATGGGGTTACAAGACTGGATTTTGGCAGACGGGAAGATTCATACTCGCTATCTTCAAGATT
TGACCCAGACAGGAAGGCTATCTAGCGTGTATCCTAATCTGCAAAATATTCCAATTCGTTTGGAGCAAGGACGCTTAATT
CGGAAAGCTTTTGTGCCGGAGTGGAAGGATAGTGTTTTACTTAGTTCTGATTATTCGCAAATCGAGTTACGGGTTTTGGC
GCATATTTCAGGCGACAAGCATTTAATTGAAGCATTCAGACATGGAGCTGATATTCATACTTCAACAGCTATGCGGGTTT
TTGGTATTGAAAAGCCAGAGGATGTGACACCAAATGATCGCCGTAATGCTAAAGCTGTCAACTTTGGTGTTGTTTATGGG
ATTTCTGATTTTGGACTTGCCAACAATCTGGGGATTAGCCGTAAAGAAGCTAAATCTTATATTGATACTTATTTTGAACG
CTATCCTGGAATTAAGAATTATATGGAAAATGTGGTACGAGAGGCTCGAGATCAAGGTTATGTAGAAACTCTCTTCCACC
GTCGTCGGGAGATCCCAGATATTAATTCTCGTAACTTTAATGTTCGAGGATTTGCAGAAAGAACGGCTATCAATTCACCA
ATTCAAGGGTCAGCTGCAGATATTCTTAAGATTGCTATGATTCGGTTAGATCAAGCTCTGCGTGCTGGGCGATTTAAAAG
TAGAATGTTGTTACAAGTCCACGACGAAATTGTACTTGAAGTACCCGCAAATGAATTGACTGCTATCAAAACGCTGGTTA
AAGAGATTATGGAATCTGCTATTGAACTCTCTGTTCCGTTGAAAGCGGACGAAAGTGCAGGTGAGACTTGGTATGAAGCC
AAGTAA

Protein sequence :
MEKKNKLLLIDGSSVAYRAFFALYNQIDRFKSPSGLHTNAIYGFHLMINHLLERVQPTHILVAFDAGKTTFRTEMYADYK
GGRAKTPEEFREQLPFIREMLQHLGIHYYDLAQYEADDIIGTLDKMAEKTAVPYDVTIVSGDKDLIQLTDDNTVVEISKK
GVAEFEEFTPAYLMEKMGISPVQFIDLKALMGDKSDNIPGVTKIGEKTGLKLLLEYGSLEGIYDHIDQLKQSKMKENLIK
DKEIAFLSRKLVTIDTQAPIEIGLEDILYQGSDIKQLGRFYDEMGFKQFKQALESEVEPEEMADIAFEEVMEVRPEMLSA
DDFFYFEMLGDNYHIDEMVGFAWGNAQKIYVSQDVRLLQQPIFKEFLENTALKVYDLKRSKVLLSRLGIELSQLAFDSRL
AKYLLSTVDNNEIATIASLYGKTKLDEDEVIYGKGAKRALPEKPILLNHLARKVAVLVETEQPMIDLLRQHDQLNLLYEM
EQPLALVLAKMEIAGIKVERETLQTMQVENERVLTQLTQEIYDLAGEEFNINSPKQLGGILFEKLGLPTAFTKKTKTGYS
TAVDVLERLAPIAPIVEKILEYRQIAKIQSTYVMGLQDWILADGKIHTRYLQDLTQTGRLSSVYPNLQNIPIRLEQGRLI
RKAFVPEWKDSVLLSSDYSQIELRVLAHISGDKHLIEAFRHGADIHTSTAMRVFGIEKPEDVTPNDRRNAKAVNFGVVYG
ISDFGLANNLGISRKEAKSYIDTYFERYPGIKNYMENVVREARDQGYVETLFHRRREIPDINSRNFNVRGFAERTAINSP
IQGSAADILKIAMIRLDQALRAGRFKSRMLLQVHDEIVLEVPANELTAIKTLVKEIMESAIELSVPLKADESAGETWYEA
K

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
polA YP_281523.1 DNA polymerase I Not tested Not named Protein 0.0 74