Gene Information

Name : ssb2 (SCIM_1465)
Accession : YP_006470366.1
Strain : Streptococcus intermedius JTH08
Genome accession: NC_018073
Putative virulence/resistance : Unknown
Product : single-strand DNA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1669227 - 1669622 bp
Length : 396 bp
Strand : -
Note : conjugal DNA-protein transfer system

DNA sequence :

ATGTATAATAAAGTAATTTTAATTGGTCGCTTGGTTAATACACCAGAGGTAAATAAAACAGCTAATGATAAATCTGTGGT
ACGTGCAACACTTGCCATCAACCGTCGCTATAAAGGGCAAAATGGCGAACGAGAAGCAGATTTTGTAAATGTCGTTGTTT
GGGGAAAGTTAGCTGAAACCTTAACAAGTTATGCAACAAAAGGAAGTTTAATATCTCTTGATGGAGAACTTCGTACCCGC
CGCTATGAGAAAGACGGTGTGACACATTATGTAACGGAAGTGCTTTGCAATGGCTTCCAGCTATTAGAAAGTCGTGCCCA
ACGAGCGCTTCGTGAAAATAATACAGGCGCAGATTTAGCAGATTTGGTTTTGGAAGAAGAAGAATTACCGTTTTAA

Protein sequence :

MYNKVILIGRLVNTPEVNKTANDKSVVRATLAINRRYKGQNGEREADFVNVVVWGKLAETLTSYATKGSLISLDGELRTR
RYEKDGVTHYVTEVLCNGFQLLESRAQRALRENNTGADLADLVLEEEELPF

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
ssb-2	NP_814280.1	single-strand binding protein	Not tested	Not named	Protein	5e-22	50
ef0020	AAM75226.1	EF0020	Not tested	Not named	Protein	4e-22	50
SAV0864	NP_371388.1	ssDNA-binding protein	Not tested	¥ÕSa1	Protein	4e-19	50
SAOV_0290	YP_005735807.1	Single-stranded DNA-binding protein, phage associated	Not tested	¥ÕSa1	Protein	3e-19	49
SAOV_1081	YP_005736576.1	ssDNA-binding protein	Not tested	¥ÕSa2	Protein	5e-19	49
SEQ_0802	YP_002746140.1	single-strand binding protein	Not tested	¥ÕSeq2	Protein	5e-19	47
SAOV_1956c	YP_005737400.1	Single-stranded DNA-binding protein, phage associated	Not tested	¥ÕSa3	Protein	4e-16	46
SH1792	YP_253707.1	single strand DNA binding protein	Not tested	¥ÕSh1	Protein	4e-18	45
EFAU085_00699	YP_008394223.1	single-strand binding protein	Not tested	Not named	Protein	6e-13	43
ef0030	AAM75236.1	EF0030	Not tested	Not named	Protein	4e-18	41
ssb-3	NP_814291.1	single-strand binding protein	Not tested	Not named	Protein	6e-18	41