Gene Information

Name : SCIM_1427 (SCIM_1427)
Accession : YP_006470328.1
Strain : Streptococcus intermedius JTH08
Genome accession: NC_018073
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1625688 - 1626416 bp
Length : 729 bp
Strand : +
Note : manganese transport

DNA sequence :
GTGTATAAAATGATACGTATCGAAAATTTAAGTGTCTCCTATCAGGAAACACTTGCTCTCAATCAGATTTCTTTGGAAAT
CCAAGGCCCAACTATCATGGGAGTTATTGGCCCAAATGGGGCTGGTAAATCCACCCTTTTAAAAGGAATGTTGGGCATCA
TTGATCATGTTGGACAAACTTACCTTGATGATAAAGAATTCTCAAAAGTACTTAGCCATGTAGCTTATGTGGAACAAAAA
ATTCACATTGACTACAACTTTCCAATCAAAGTGAAAGAATGTGTGTCGCTTGGATTGTATCCAAAAGTGAAACTTTTCCA
CAGGTTAACAAATAAAGAATGGGAAAAAGTGACAAATGCACTACGCATTGTCGGCTTAGAGGATTATGCTGAACGCCAAA
TCAGCCAATTGTCAGGAGGGCAATTTCAACGGGTCTTGATTGCGCGCTGTCTAGTACAAGAAGCTGACTGTATCTTTCTG
GATGAACCATTCGTTGGGATTGATTCAATCAGTGAAGAAATCACCATGACAACGCTACGCAGTCTAAAAGAACAAGGAAA
AACGATTCTCATCGTTCACCATGACTTAGGAAAAGTCCCACATTACTTTGATCAAGTTTTAATTTTGAACAAGGAACTCA
TTGCCATTGGAGAAACTTCATCAACTTTCACAGAAGAAAACTTGAAAAAAGCCTATGGCTCTCAGCTTTTTGTAAATGGA
GGTCTCTAA

Protein sequence :
MYKMIRIENLSVSYQETLALNQISLEIQGPTIMGVIGPNGAGKSTLLKGMLGIIDHVGQTYLDDKEFSKVLSHVAYVEQK
IHIDYNFPIKVKECVSLGLYPKVKLFHRLTNKEWEKVTNALRIVGLEDYAERQISQLSGGQFQRVLIARCLVQEADCIFL
DEPFVGIDSISEEITMTTLRSLKEQGKTILIVHHDLGKVPHYFDQVLILNKELIAIGETSSTFTEENLKKAYGSQLFVNG
GL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 3e-71 59
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 2e-71 59

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SCIM_1427 YP_006470328.1 ABC transporter ATP-binding protein BAC0400 Protein 1e-44 43