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Name : clpC (SCIM_0107) Accession : YP_006469009.1 Strain : Streptococcus intermedius JTH08 Genome accession: NC_018073 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit Function : - COG functional category : - COG ID : - EC number : - Position : 135861 - 138290 bp Length : 2430 bp Strand : + Note : - DNA sequence : ATGAAATATTCAAAAGCTTTGACAGAAAGTATTGAATCAGCACAGTTATTAGCAAGTCATTTTGAAACGGATTATTTAGA GTCTTGGCAGCTGTTGATTGCTATGGCAAATAATCCTTATAGTGTTGCTGGTTCAGTTTTAAATGATTACCCACTTGAAA TTGATGATTTTGAAAAGGCAGCTTTTCATATCACGGGGAAAGTCTATCAACAAGAGGGAGACTTTACTATTTGGCCGTTT TCTTATCGCATGAAAGTGCTATTTTTGACTGCTGAACAAATTGCAGGGGCGGTTCATGCTAATAATCTTGGGACAGAGCA TATATTGCTAGCTATGTTATTTGACCAAGGAAGCTTGGCAGCGCGTATTCTTGAATTTATTGGTTTTAGTTACGAAGATA AAGAAGGCGTTTTGCGCATGACAGATCTGCGGAAAAATTTAGAGCATAAGGCCAGCTGGAATAAAGAGGATTTAAAGGCT ATTCGTCACCTAAATAAAAGTGCTGCAGCAACAAGACAAACGATGGCTAATATGATGGGAATGCCTCCTGCAACCAGTGG CGGACTAGAAGATTATACTCGTGATCTAACTGAAATGGCTCATATGGGCCTTTTAGAACCGATCATTGGGCGGGATAAAG AGATTTCTCGCATACTTCAGATTTTAAGTCGTAAGACAAAAAACAATCCGGTTTTGGTAGGAGATGCAGGAGTTGGGAAG ACAGCATTAGCTCTGGGTTTGGCGCAACGTGTGGCAGATGGTCAAGTTCCAAATGAGCTTGCAAAGATGAGAGTTTTAGA GCTAGATTTAATGAATGTGGTGGCTGGAACTCGTTTTCGTGGTGATTTTGAAGAACGGATGAACAATATTATCAATGATA TTGAAGCAGATGGGCATGTTATTCTCTTCATTGATGAGCTTCATACCATTATGGGTTCTGGCAGCGGGATTGACTCGACA TTAGATGCAGCAAATATTCTCAAGCCGGCTTTGGCTAAAGGAACGCTCAGAACGATCGGTGCAACAACACAAGAAGAGTA CCAAAAATATATCGAAAAAGATGCAGCTCTTTCACGAAGATTTGCCAAGGTTACTATTGAAGAAGCAACGGTAGCTGACA GCATTGCTATTTTACAGGGACTCAAGAAAAGTTATGAAGATCACCACAAGGTCGTGATTACGGATTCGGCAATTGAGACG GCTGTTAAGTATGCGCATCGTTACCTGACTAGTAAACATCTACCTGACTCAGCGATTGACTTGCTAGACGAAGCTGCTGC AAGGGTACAAAATAAAAGCCCGCAAAATCACGTAAAAGCAGAATTGAGTGCAGCAGATGAGGCTTTAATGGCAGGCGATT GGAACAAAGTTGATACGTTGTTGGAGAAAGAGAGTCAGCCAATTGTTTATAAATTAAGGGTGAAAGACGAGGATGTTTTA GCAACACTCAGCAGTTTATCAGGTATTCCTGTGCAAAAGTTGACACAAACAGATGCGAAGAAATACCTCAATTTAGAAAA GGAGTTACACAAACGAGTTATCGGGCAGAATGAAGCAATTTCTGCTATTAGTCGAGCGATTCGGCGCAATCAATCTGGTA TCCGCACTAGCAAGCGCCCAATTGGCTCCTTTATGTTCTTAGGGCCAACCGGGGTCGGAAAAACTGAGCTAGCTAAGGCT TTGGCAGAAGTTCTCTTTGATGACGAAACAGCGTTAATTCGTTTTGATATGTCCGAATACATGGAGAAATTTGCTGCTAG TCGTCTCAATGGAGCACCTCCAGGCTATGTTGGTTATGAAGAAGGGGGAGAATTAACTGAAAAGGTGCGTAATCGTCCTT ACTCTGTGCTCCTCTTTGACGAAGTGGAAAAAGCTCATCCTGATATTTTCAATGTGCTGCTCCAAGTCCTAGATGACGGG GTTCTGACGGATAGCAAGGGCCGTAAGGTAGATTTTTCCAATACTATTATCATTATGACCAGCAATCTTGGTGCGACAAG TTTACGGGACGATAAGACGGTTGGGTTCGGAGCAAGAGATGTTCGCTTTGATCATGAAAATATGGAAAAACGAATGATGG AAGAGCTAAAGAAAGCTTATCGTCCAGAATTTATTAACCGAATTGATGAAAAGGTTGTTTTTCACAGTTTGACTAGCGAA GACATGCAGGAAGTGGTGAAAATTATGGTGCAACCGCTCATTTCTAGTCTTGCAGAAAAAGGAATTAAACTCAAATTCCA ACCGAGTGCTTTGAAGCTTCTAGCTCAAGAGGGCTATGATCCTGAAATGGGAGCTCGTCCATTGCGTCGAATTCTACAAA CTCGAGTGGAAGACCATTTATCAGAATTACTTTTAGCAGGTGAGCTAAAAACGGGGCAAAGCTTGAAAGTCGGTGTCAAG GCTGGAAAATTGAAGTTTGAAGTGCTCTGA Protein sequence : MKYSKALTESIESAQLLASHFETDYLESWQLLIAMANNPYSVAGSVLNDYPLEIDDFEKAAFHITGKVYQQEGDFTIWPF SYRMKVLFLTAEQIAGAVHANNLGTEHILLAMLFDQGSLAARILEFIGFSYEDKEGVLRMTDLRKNLEHKASWNKEDLKA IRHLNKSAAATRQTMANMMGMPPATSGGLEDYTRDLTEMAHMGLLEPIIGRDKEISRILQILSRKTKNNPVLVGDAGVGK TALALGLAQRVADGQVPNELAKMRVLELDLMNVVAGTRFRGDFEERMNNIINDIEADGHVILFIDELHTIMGSGSGIDST LDAANILKPALAKGTLRTIGATTQEEYQKYIEKDAALSRRFAKVTIEEATVADSIAILQGLKKSYEDHHKVVITDSAIET AVKYAHRYLTSKHLPDSAIDLLDEAAARVQNKSPQNHVKAELSAADEALMAGDWNKVDTLLEKESQPIVYKLRVKDEDVL ATLSSLSGIPVQKLTQTDAKKYLNLEKELHKRVIGQNEAISAISRAIRRNQSGIRTSKRPIGSFMFLGPTGVGKTELAKA LAEVLFDDETALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNRPYSVLLFDEVEKAHPDIFNVLLQVLDDG VLTDSKGRKVDFSNTIIIMTSNLGATSLRDDKTVGFGARDVRFDHENMEKRMMEELKKAYRPEFINRIDEKVVFHSLTSE DMQEVVKIMVQPLISSLAEKGIKLKFQPSALKLLAQEGYDPEMGARPLRRILQTRVEDHLSELLLAGELKTGQSLKVGVK AGKLKFEVL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 8e-141 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_006469009.1 | ATP-dependent Clp protease ATP-binding subunit | VFG0079 | Protein | 5e-165 | 47 |
| clpC | YP_006469009.1 | ATP-dependent Clp protease ATP-binding subunit | VFG0080 | Protein | 3e-124 | 44 |
