Gene Information

Name : SCIM_1189 (SCIM_1189)
Accession : YP_006470091.1
Strain : Streptococcus intermedius JTH08
Genome accession: NC_018073
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1362906 - 1363553 bp
Length : 648 bp
Strand : +
Note : -

DNA sequence :
ATGACAATTTTAAAAATGGATTCAGTTAGTTACCAATACAATAGCCTACAAGAAAATGTATTGAATCAGATCACAGCTTC
ATTTGAAGAAGGAAAATTTTATGCTATTATAGGGAAATCTGGTGCAGGAAAATCAACCTTGCTTTCCCTTCTTGCAGGAC
TTGATACTCCTACAAAAGGAAAAATCCTCTTTGAAGATCAAGACATCGCTCAAAAAGGCTATAACCATCACAGACGGAAA
CAAATCTCCCTGGTTTTCCAAAATTATAATTTAATCGATTACTTAACTCCGATGGAGAATGTTCGACTCGTAAATTCCCA
AGCAAGTAAAGATAGCTTACTACAACTTGGACTCAACGAAAAAGAAATCCATCGTAACGTATTACGATTATCAGGTGGCC
AGCAGCAACGGGTTGCTATTGCACGCGCTCTTGCATCTACAGCACCAATTATCTTAGCAGATGAACCAACTGGGAACTTA
GATGAAGGTACTGCCATGGACATCATTGAAGTCCTAATTAAATCAGCTAAACAAAAAAATAAATGTGTGATTGTTGTAAC
ACACAGTAAAGAGTTAGCTAATAAAGCGGACGTCGTCTTAGAGTTAAGCAATAAGAACTTAGTCGAAGTCACTAAGAATT
ATAAATAA

Protein sequence :
MTILKMDSVSYQYNSLQENVLNQITASFEEGKFYAIIGKSGAGKSTLLSLLAGLDTPTKGKILFEDQDIAQKGYNHHRRK
QISLVFQNYNLIDYLTPMENVRLVNSQASKDSLLQLGLNEKEIHRNVLRLSGGQQQRVAIARALASTAPIILADEPTGNL
DEGTAMDIIEVLIKSAKQKNKCVIVVTHSKELANKADVVLELSNKNLVEVTKNYK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-21 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-21 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-21 41
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-21 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SCIM_1189 YP_006470091.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-23 41