Gene Information

Name : SCIM_1103 (SCIM_1103)
Accession : YP_006470005.1
Strain : Streptococcus intermedius JTH08
Genome accession: NC_018073
Putative virulence/resistance : Unknown
Product : sortase family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1258452 - 1259339 bp
Length : 888 bp
Strand : -
Note : -

DNA sequence :
ATGAAATACTGGGATTGCCTAATACAATCCCAGTATTTATATGAGGTTAGAGTGAAACATAAGAAAAAAAATATTGGTTT
AATTCTATTTTTTATATTTGGTTTTCTTATTCTGATATATCCGATTGTTAGTAATGCTTGGAATTCCTATCGGGCAAATC
AACTTTTATCGTCTTATGACAAAAAAATCAAATCAAATCAAAAAAAAGAAAATATCAAGATGTGGGAAGATGCAATTGCG
TATAACAATGAGTTGGGAATACAACCAGTACCGGATGCCTTCTCTGTACGGGATGGTATTCATGATACAAAATATGAATC
GCTTTTGAATGTGAACAAAAATGGTATTATGGGATATGTTGATATTCCGTCAATTAAAGTAAAACTTCCAATTTATCACT
ATACTACTGACGAGTCGCTAAGCAAGGGAGCTGGTCACTTATTAGGGAGTTCCTTACCAGTTGGTGGAGAGGGGACTCAT
GCTGTTGTGTCTGCTCATAGGGGGCTTCCAACTGCAGAGATGTTTACCAATCTTCCTAGTTTAAAAAAAGGAAAGTATTT
TTATTTTCATGTTTTAGATAAAATTATTGCCTATAAAGTTGACCAGATTTTAACAGTTAAACCTTATCACGTTTCTGCAT
TATCTGGAGAAAAAGGAAAAGATTATGCGACGTTGATTACTTGTACACCATATGGGGTCAACACGGAGCGTTTGCTCGTT
AGAGGACATAGGGTACCATATAATCCAAAAACATATCAAAAGGAAAAAGCAAGTAAAGGAAAAATTGATTCTAGTTTTTG
GTTCCTGCAGTTGCTATCGGTTGTGATCGGATTGATATTAGCTTTTGTAGTCGTCTATTTTTATGTATTATTTACTAAAA
AGAAGTAA

Protein sequence :
MKYWDCLIQSQYLYEVRVKHKKKNIGLILFFIFGFLILIYPIVSNAWNSYRANQLLSSYDKKIKSNQKKENIKMWEDAIA
YNNELGIQPVPDAFSVRDGIHDTKYESLLNVNKNGIMGYVDIPSIKVKLPIYHYTTDESLSKGAGHLLGSSLPVGGEGTH
AVVSAHRGLPTAEMFTNLPSLKKGKYFYFHVLDKIIAYKVDQILTVKPYHVSALSGEKGKDYATLITCTPYGVNTERLLV
RGHRVPYNPKTYQKEKASKGKIDSSFWFLQLLSVVIGLILAFVVVYFYVLFTKKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
srtB YP_005137208.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 1e-43 44
srtC YP_005137206.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 4e-39 42